G1851313


Basic Information

Item Value
gene id G1851313
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 28989291 ~ 28989518 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2119023
gacctatacctatcctaccatgcctttctaaggtcttcgaaagccaagtcaacaagcagattaccgaccatttcgaatctcgccataccttctctgctatgcaatctggtttcagagctggtcatgggtgcacctcagccacgctcaaggtcctaaacgatatcttaaccgccatcgataagaaacattactgtgcagccgtattcattgatctggccaaggctttcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2119023 True 228 lncRNA 0.47 1 28989291 28989518

Neighbor

gene id symbol gene type direction distance location
LOC110502552 tsn14 coding upstream 71885 28901697 ~ 28917406 (+)
LOC110502551 LOC106607927 coding upstream 165497 28818971 ~ 28823794 (+)
LOC110502550 LOC106607923 coding upstream 192429 28793894 ~ 28796862 (+)
LOC110502549 LOC106608800 coding upstream 208589 28777133 ~ 28780702 (+)
slc22a15 slc22a15 coding upstream 317779 28662674 ~ 28671512 (+)
LOC110502556 NA coding downstream 142125 29131643 ~ 29134853 (+)
LOC118943859 NA coding downstream 623734 29613252 ~ 29616570 (+)
si:ch1073-126c3.2 NA coding downstream 1004079 29993597 ~ 29995811 (+)
gfra1a rtgfra1 coding downstream 1054009 30043527 ~ 30144813 (+)
LOC110502560 LOC106607954 coding downstream 1595378 30547124 ~ 30659333 (+)
G1851208 NA non-coding upstream 10589 28978427 ~ 28978702 (+)
G1851204 NA non-coding upstream 17687 28971193 ~ 28971604 (+)
G1851202 NA non-coding upstream 20160 28968871 ~ 28969131 (+)
G1851194 NA non-coding upstream 27334 28961708 ~ 28961957 (+)
G1851181 NA non-coding upstream 42153 28946934 ~ 28947138 (+)
G1851319 NA non-coding downstream 3448 28992966 ~ 28993191 (+)
G1851490 NA non-coding downstream 178056 29167574 ~ 29175373 (+)
G1851501 NA non-coding downstream 193256 29182774 ~ 29184262 (+)
G1851531 NA non-coding downstream 243698 29233216 ~ 29233434 (+)
G1851536 NA non-coding downstream 248908 29238426 ~ 29238742 (+)
LOC110502541 LOC106607837 other upstream 464054 28497576 ~ 28571528 (+)
LOC110502528 bic1a other upstream 983077 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 other upstream 996328 27990245 ~ 27993189 (+)
G1849208 LOC106607606 other upstream 1713032 27274338 ~ 27276259 (+)
G1845108 NA other upstream 4635045 24326264 ~ 24354246 (+)
G1851386 NA other downstream 53843 29043361 ~ 29075998 (+)
G1852590 NA other downstream 1028972 30018490 ~ 30025046 (+)
G1853092 NA other downstream 1816032 30805550 ~ 30806454 (+)
G1853162 rps27a other downstream 1837067 30826585 ~ 30834692 (+)

Expression


Co-expression Network