G1851319


Basic Information

Item Value
gene id G1851319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 28992966 ~ 28993191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2119029
GGTCTGGGAGAGAGGAAATACCATCTCTTCTGAGATTGCAGTATCAACTGTAGGGTGAAAGATGTAATTTAATCCCAGTACAGGGATCTCCTAtgtgtgcacacgtgtgtgtgtgtgtgtgtatagaattGTTCTgcagaaaataaagacaaatgcCCCTAGGCAAAATGGCATACTGAACACAGTGGTGCAGATCGCCTCAAGATAAACACGTAATATTCAAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2119029 True 226 lncRNA 0.42 1 28992966 28993191

Neighbor

gene id symbol gene type direction distance location
LOC110502552 tsn14 coding upstream 75560 28901697 ~ 28917406 (+)
LOC110502551 LOC106607927 coding upstream 169172 28818971 ~ 28823794 (+)
LOC110502550 LOC106607923 coding upstream 196104 28793894 ~ 28796862 (+)
LOC110502549 LOC106608800 coding upstream 212264 28777133 ~ 28780702 (+)
slc22a15 slc22a15 coding upstream 321454 28662674 ~ 28671512 (+)
LOC110502556 NA coding downstream 138452 29131643 ~ 29134853 (+)
LOC118943859 NA coding downstream 620061 29613252 ~ 29616570 (+)
si:ch1073-126c3.2 NA coding downstream 1000406 29993597 ~ 29995811 (+)
gfra1a rtgfra1 coding downstream 1050336 30043527 ~ 30144813 (+)
LOC110502560 LOC106607954 coding downstream 1591705 30547124 ~ 30659333 (+)
G1851313 NA non-coding upstream 3448 28989291 ~ 28989518 (+)
G1851208 NA non-coding upstream 14264 28978427 ~ 28978702 (+)
G1851204 NA non-coding upstream 21362 28971193 ~ 28971604 (+)
G1851202 NA non-coding upstream 23835 28968871 ~ 28969131 (+)
G1851194 NA non-coding upstream 31009 28961708 ~ 28961957 (+)
G1851490 NA non-coding downstream 174383 29167574 ~ 29175373 (+)
G1851501 NA non-coding downstream 189583 29182774 ~ 29184262 (+)
G1851531 NA non-coding downstream 240025 29233216 ~ 29233434 (+)
G1851536 NA non-coding downstream 245235 29238426 ~ 29238742 (+)
G1851544 NA non-coding downstream 262229 29255420 ~ 29255621 (+)
LOC110502541 LOC106607837 other upstream 467729 28497576 ~ 28571528 (+)
LOC110502528 bic1a other upstream 986752 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 other upstream 1000003 27990245 ~ 27993189 (+)
G1849208 LOC106607606 other upstream 1716707 27274338 ~ 27276259 (+)
G1845108 NA other upstream 4638720 24326264 ~ 24354246 (+)
G1851386 NA other downstream 50170 29043361 ~ 29075998 (+)
G1852590 NA other downstream 1025299 30018490 ~ 30025046 (+)
G1853092 NA other downstream 1812359 30805550 ~ 30806454 (+)
G1853162 rps27a other downstream 1833394 30826585 ~ 30834692 (+)

Expression


Co-expression Network