G1851531


Basic Information

Item Value
gene id G1851531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 29233216 ~ 29233434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2119248
AAGTCACACAACGATTCAAGAGGAATCTGTGGTTAAGAACATAATACCCATGGAGCTTCCTTGGAAGAACTCAATTAAAATCTCTGTACACAGACACTTAAAATGGCCGTGCATATGGACCAGGTGGATTTTGATGCTTTCTTCAAATTTCCCCTCAAGTCAAAAATGCAACATATTTAGTCAGACGCTACTCTGTAGTACTGCTGAGCCTAGTAGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2119248 True 219 lncRNA 0.41 1 29233216 29233434

Neighbor

gene id symbol gene type direction distance location
LOC110502556 NA coding upstream 98363 29131643 ~ 29134853 (+)
LOC110502552 tsn14 coding upstream 315810 28901697 ~ 28917406 (+)
LOC110502551 LOC106607927 coding upstream 409422 28818971 ~ 28823794 (+)
LOC110502550 LOC106607923 coding upstream 436354 28793894 ~ 28796862 (+)
LOC110502549 LOC106608800 coding upstream 452514 28777133 ~ 28780702 (+)
LOC118943859 NA coding downstream 379818 29613252 ~ 29616570 (+)
si:ch1073-126c3.2 NA coding downstream 760163 29993597 ~ 29995811 (+)
gfra1a rtgfra1 coding downstream 810093 30043527 ~ 30144813 (+)
LOC110502560 LOC106607954 coding downstream 1351462 30547124 ~ 30659333 (+)
LOC110502563 LOC106607969 coding downstream 1433110 30666544 ~ 30682724 (+)
G1851501 NA non-coding upstream 48954 29182774 ~ 29184262 (+)
G1851490 NA non-coding upstream 57843 29167574 ~ 29175373 (+)
G1851319 NA non-coding upstream 240025 28992966 ~ 28993191 (+)
G1851313 NA non-coding upstream 243698 28989291 ~ 28989518 (+)
G1851208 NA non-coding upstream 254514 28978427 ~ 28978702 (+)
G1851536 NA non-coding downstream 4992 29238426 ~ 29238742 (+)
G1851544 NA non-coding downstream 21986 29255420 ~ 29255621 (+)
G1851562 NA non-coding downstream 43506 29276940 ~ 29277160 (+)
G1851568 NA non-coding downstream 49345 29282779 ~ 29283071 (+)
G1851584 NA non-coding downstream 79352 29312786 ~ 29312986 (+)
G1851386 NA other upstream 157218 29043361 ~ 29075998 (+)
LOC110502541 LOC106607837 other upstream 707979 28497576 ~ 28571528 (+)
LOC110502528 bic1a other upstream 1227002 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 other upstream 1240253 27990245 ~ 27993189 (+)
G1849208 LOC106607606 other upstream 1956957 27274338 ~ 27276259 (+)
G1852590 NA other downstream 785056 30018490 ~ 30025046 (+)
G1853092 NA other downstream 1572116 30805550 ~ 30806454 (+)
G1853162 rps27a other downstream 1593151 30826585 ~ 30834692 (+)
LOC110502584 LOC106608814 other downstream 2386983 31620398 ~ 31624184 (+)

Expression


Co-expression Network