G1851925



Basic Information


Item Value
gene id G1851925
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 29236253 ~ 29236592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2119658
gacttgtttatactgtattattgactgtatgtttgttttactccatgtgtaactctgtgtcgttgtatgtgtcgaactgctttgctttatcttggccaggtcgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaataaaggtgaaataaaaaaataaaaaaaataaaaaatattacccttggtctgaaattggagtagatagccaaagcgaatttaccagctacgtctgtCAACAGTTGTTGttgtgacattctattgaaatgcatacttgcatagtggagtcttttgttaagacatgtagctcgctagctaaacaattaaccataa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2119658 True 340 lncRNA 0.35 1 29236253 29236592

Neighbor


gene id symbol gene type direction distance location
LOC110503060 NA coding downstream 254415 28969160 ~ 28981892 (-)
LOC110502553 NA coding downstream 303653 28919846 ~ 28932600 (-)
LOC110503100 hecd2 coding downstream 357826 28859178 ~ 28878427 (-)
LOC110502548 LOC106607892 coding downstream 542604 28688014 ~ 28693649 (-)
LOC110502547 LOC106607910 coding downstream 549599 28683439 ~ 28686654 (-)
LOC110528531 NA coding upstream 503963 29740555 ~ 29746968 (-)
LOC110502559 LOC106607945 coding upstream 917477 30154069 ~ 30504037 (-)
LOC110502561 smek2 coding upstream 1446865 30683457 ~ 30707617 (-)
LOC110502562 LOC106607983 coding upstream 1471229 30707821 ~ 30716157 (-)
LOC110502567 rps27a coding upstream 1589995 30826587 ~ 30834728 (-)
G1851921 NA non-coding downstream 2542 29233492 ~ 29233711 (-)
G1851871 NA non-coding downstream 61344 29166769 ~ 29174909 (-)
G1851867 NA non-coding downstream 74297 29161560 ~ 29161956 (-)
G1851442 NA non-coding downstream 149891 29086143 ~ 29086362 (-)
G1851357 NA non-coding downstream 208024 29027949 ~ 29028229 (-)
G1851928 NA non-coding upstream 3519 29240111 ~ 29240376 (-)
G1851956 NA non-coding upstream 43236 29279828 ~ 29280029 (-)
G1851957 NA non-coding upstream 43540 29280132 ~ 29280335 (-)
G1851958 NA non-coding upstream 43883 29280475 ~ 29280727 (-)
G1851987 NA non-coding upstream 77481 29314073 ~ 29314344 (-)
G1850441 NA other downstream 1158002 28074925 ~ 28078251 (-)
G1846858 NA other downstream 3795866 25439807 ~ 25440387 (-)
LOC110502462 LOC106607169 other downstream 5890482 23344353 ~ 23358461 (-)
LOC110502461 LOC106607165 other downstream 6017983 23213905 ~ 23218749 (-)
LOC110502574 LOC106608078 other upstream 1915017 31151609 ~ 31239202 (-)
G1854905 NA other upstream 1981005 31217597 ~ 31218171 (-)
G1855326 NA other upstream 2743405 31979997 ~ 31981333 (-)
G1855821 NA other upstream 3278474 32515066 ~ 32515408 (-)
G1855822 LOC106608363 other upstream 3279157 32515749 ~ 32516281 (-)

Expression



Co-expression Network