G1851584


Basic Information

Item Value
gene id G1851584
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 29312786 ~ 29312986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2119302
tttttttttggtagccaaatgtgatgtacaaaacggagctatttctaatacacaaagaatctttttggaagaactgagcatctgctatctaactgagagtctcctcattgaaaacatcagaagttcttcaaaggtaaatgattttatttgaaggcttttatgtttttgttgaaatgttgcgtgctggatgctaacgctaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2119302 True 201 lncRNA 0.34 1 29312786 29312986

Neighbor

gene id symbol gene type direction distance location
LOC110502556 NA coding upstream 177933 29131643 ~ 29134853 (+)
LOC110502552 tsn14 coding upstream 395380 28901697 ~ 28917406 (+)
LOC110502551 LOC106607927 coding upstream 488992 28818971 ~ 28823794 (+)
LOC110502550 LOC106607923 coding upstream 515924 28793894 ~ 28796862 (+)
LOC110502549 LOC106608800 coding upstream 532084 28777133 ~ 28780702 (+)
LOC118943859 NA coding downstream 300266 29613252 ~ 29616570 (+)
si:ch1073-126c3.2 NA coding downstream 680611 29993597 ~ 29995811 (+)
gfra1a rtgfra1 coding downstream 730541 30043527 ~ 30144813 (+)
LOC110502560 LOC106607954 coding downstream 1271910 30547124 ~ 30659333 (+)
LOC110502563 LOC106607969 coding downstream 1353558 30666544 ~ 30682724 (+)
G1851568 NA non-coding upstream 29715 29282779 ~ 29283071 (+)
G1851562 NA non-coding upstream 35626 29276940 ~ 29277160 (+)
G1851544 NA non-coding upstream 57165 29255420 ~ 29255621 (+)
G1851536 NA non-coding upstream 74044 29238426 ~ 29238742 (+)
G1851531 NA non-coding upstream 79352 29233216 ~ 29233434 (+)
G1851651 NA non-coding downstream 91078 29404064 ~ 29404283 (+)
G1851693 NA non-coding downstream 154925 29467911 ~ 29468201 (+)
G1851695 NA non-coding downstream 158462 29471448 ~ 29471697 (+)
G1851697 NA non-coding downstream 160629 29473615 ~ 29473859 (+)
G1851701 NA non-coding downstream 163745 29476731 ~ 29477005 (+)
G1851386 NA other upstream 236788 29043361 ~ 29075998 (+)
LOC110502541 LOC106607837 other upstream 787549 28497576 ~ 28571528 (+)
LOC110502528 bic1a other upstream 1306572 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 other upstream 1319823 27990245 ~ 27993189 (+)
G1849208 LOC106607606 other upstream 2036527 27274338 ~ 27276259 (+)
G1852590 NA other downstream 705504 30018490 ~ 30025046 (+)
G1853092 NA other downstream 1492564 30805550 ~ 30806454 (+)
G1853162 rps27a other downstream 1513599 30826585 ~ 30834692 (+)
LOC110502584 LOC106608814 other downstream 2307431 31620398 ~ 31624184 (+)

Expression


Co-expression Network