G1851731


Basic Information

Item Value
gene id G1851731
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 29524469 ~ 29524739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2119457
ataaaaaatatctttaaggaacaaaaggaacatttgctgtctaactgggagtctcgtgagtgaaaacatccgaagatcaaaggtaagcggttaatttgattgcttttctgattttcgtgaccaagcttcctgatgctaagtgtacataatgctttgctatcgataaacttacacagacgcttgtattgctttcgctgtaaagcataatttcaaaatctgagacgacagggtgattaacaaaaggctaagctgtgtttcgctatatttcact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2119457 True 271 lncRNA 0.37 1 29524469 29524739

Neighbor

gene id symbol gene type direction distance location
LOC110502556 NA coding upstream 389616 29131643 ~ 29134853 (+)
LOC110502552 tsn14 coding upstream 607063 28901697 ~ 28917406 (+)
LOC110502551 LOC106607927 coding upstream 700675 28818971 ~ 28823794 (+)
LOC110502550 LOC106607923 coding upstream 727607 28793894 ~ 28796862 (+)
LOC110502549 LOC106608800 coding upstream 743767 28777133 ~ 28780702 (+)
LOC118943859 NA coding downstream 88513 29613252 ~ 29616570 (+)
si:ch1073-126c3.2 NA coding downstream 468858 29993597 ~ 29995811 (+)
gfra1a rtgfra1 coding downstream 518788 30043527 ~ 30144813 (+)
LOC110502560 LOC106607954 coding downstream 1060157 30547124 ~ 30659333 (+)
LOC110502563 LOC106607969 coding downstream 1141805 30666544 ~ 30682724 (+)
G1851701 NA non-coding upstream 47464 29476731 ~ 29477005 (+)
G1851697 NA non-coding upstream 50610 29473615 ~ 29473859 (+)
G1851695 NA non-coding upstream 52772 29471448 ~ 29471697 (+)
G1851693 NA non-coding upstream 56268 29467911 ~ 29468201 (+)
G1851651 NA non-coding upstream 120186 29404064 ~ 29404283 (+)
G1851756 NA non-coding downstream 34059 29558798 ~ 29599366 (+)
G1852250 NA non-coding downstream 130667 29655406 ~ 29655712 (+)
G1852257 NA non-coding downstream 132898 29657637 ~ 29657887 (+)
G1852258 LOC100380853 non-coding downstream 134282 29659021 ~ 29659249 (+)
G1852323 NA non-coding downstream 213146 29737885 ~ 29821423 (+)
G1851386 NA other upstream 448471 29043361 ~ 29075998 (+)
LOC110502541 LOC106607837 other upstream 999232 28497576 ~ 28571528 (+)
LOC110502528 bic1a other upstream 1518255 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 other upstream 1531506 27990245 ~ 27993189 (+)
G1849208 LOC106607606 other upstream 2248210 27274338 ~ 27276259 (+)
G1852590 NA other downstream 493751 30018490 ~ 30025046 (+)
G1853092 NA other downstream 1280811 30805550 ~ 30806454 (+)
G1853162 rps27a other downstream 1301846 30826585 ~ 30834692 (+)
LOC110502584 LOC106608814 other downstream 2095678 31620398 ~ 31624184 (+)

Expression


Co-expression Network