Gene
RNA
| Item | Value |
|---|---|
| gene id | G1852247 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 29653758 ~ 29654027 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2119988 | True | 270 | lncRNA | 0.43 | 1 | 29653758 | 29654027 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502554 | LOC106607935 | coding | downstream | 20998 | 29121046 ~ 29632760 (-) |
| LOC110503060 | NA | coding | downstream | 671920 | 28969160 ~ 28981892 (-) |
| LOC110502553 | NA | coding | downstream | 721158 | 28919846 ~ 28932600 (-) |
| LOC110503100 | hecd2 | coding | downstream | 775331 | 28859178 ~ 28878427 (-) |
| LOC110502548 | LOC106607892 | coding | downstream | 960109 | 28688014 ~ 28693649 (-) |
| LOC110528531 | NA | coding | upstream | 86528 | 29740555 ~ 29746968 (-) |
| LOC110502559 | LOC106607945 | coding | upstream | 500042 | 30154069 ~ 30504037 (-) |
| LOC110502561 | smek2 | coding | upstream | 1029430 | 30683457 ~ 30707617 (-) |
| LOC110502562 | LOC106607983 | coding | upstream | 1053794 | 30707821 ~ 30716157 (-) |
| LOC110502567 | rps27a | coding | upstream | 1172560 | 30826587 ~ 30834728 (-) |
| G1852136 | NA | non-coding | downstream | 129025 | 29524511 ~ 29524733 (-) |
| G1852133 | NA | non-coding | downstream | 131000 | 29522557 ~ 29522758 (-) |
| G1852126 | NA | non-coding | downstream | 136854 | 29516676 ~ 29516904 (-) |
| G1852099 | NA | non-coding | downstream | 174078 | 29479450 ~ 29479680 (-) |
| G1852052 | NA | non-coding | downstream | 250497 | 29403036 ~ 29403261 (-) |
| G1852260 | NA | non-coding | upstream | 5344 | 29659371 ~ 29659631 (-) |
| G1852263 | NA | non-coding | upstream | 6900 | 29660927 ~ 29661158 (-) |
| G1852273 | NA | non-coding | upstream | 14362 | 29668389 ~ 29668681 (-) |
| G1852487 | NA | non-coding | upstream | 125342 | 29779369 ~ 29779695 (-) |
| G1854107 | NA | non-coding | upstream | 300797 | 29954824 ~ 29955041 (-) |
| G1850441 | NA | other | downstream | 1575507 | 28074925 ~ 28078251 (-) |
| G1846858 | NA | other | downstream | 4213371 | 25439807 ~ 25440387 (-) |
| LOC110502462 | LOC106607169 | other | downstream | 6307987 | 23344353 ~ 23358461 (-) |
| LOC110502461 | LOC106607165 | other | downstream | 6435488 | 23213905 ~ 23218749 (-) |
| LOC110502574 | LOC106608078 | other | upstream | 1497582 | 31151609 ~ 31239202 (-) |
| G1854905 | NA | other | upstream | 1563570 | 31217597 ~ 31218171 (-) |
| G1855326 | NA | other | upstream | 2325970 | 31979997 ~ 31981333 (-) |
| G1855821 | NA | other | upstream | 2861039 | 32515066 ~ 32515408 (-) |
| G1855822 | LOC106608363 | other | upstream | 2861722 | 32515749 ~ 32516281 (-) |
