Gene
RNA
| Item | Value |
|---|---|
| gene id | G1852323 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 29737885 ~ 29821423 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2120067 | True | 489 | lncRNA | 0.41 | 2 | 29737885 | 29821423 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943859 | NA | coding | upstream | 121315 | 29613252 ~ 29616570 (+) |
| LOC110502556 | NA | coding | upstream | 603032 | 29131643 ~ 29134853 (+) |
| LOC110502552 | tsn14 | coding | upstream | 820479 | 28901697 ~ 28917406 (+) |
| LOC110502551 | LOC106607927 | coding | upstream | 914091 | 28818971 ~ 28823794 (+) |
| LOC110502550 | LOC106607923 | coding | upstream | 941023 | 28793894 ~ 28796862 (+) |
| si:ch1073-126c3.2 | NA | coding | downstream | 172174 | 29993597 ~ 29995811 (+) |
| gfra1a | rtgfra1 | coding | downstream | 222104 | 30043527 ~ 30144813 (+) |
| LOC110502560 | LOC106607954 | coding | downstream | 763473 | 30547124 ~ 30659333 (+) |
| LOC110502563 | LOC106607969 | coding | downstream | 845121 | 30666544 ~ 30682724 (+) |
| LOC110502565 | LOC106607988 | coding | downstream | 906965 | 30728388 ~ 30816688 (+) |
| G1852258 | LOC100380853 | non-coding | upstream | 78636 | 29659021 ~ 29659249 (+) |
| G1852257 | NA | non-coding | upstream | 79998 | 29657637 ~ 29657887 (+) |
| G1852250 | NA | non-coding | upstream | 82173 | 29655406 ~ 29655712 (+) |
| G1851756 | NA | non-coding | upstream | 138519 | 29558798 ~ 29599366 (+) |
| G1851731 | NA | non-coding | upstream | 213146 | 29524469 ~ 29524739 (+) |
| G1852573 | NA | non-coding | downstream | 62992 | 29884415 ~ 29884633 (+) |
| G1852628 | NA | non-coding | downstream | 142798 | 29964221 ~ 29964445 (+) |
| G1852630 | NA | non-coding | downstream | 143463 | 29964886 ~ 29965183 (+) |
| G1852631 | NA | non-coding | downstream | 145436 | 29966859 ~ 29967132 (+) |
| G1852632 | NA | non-coding | downstream | 145790 | 29967213 ~ 29967421 (+) |
| G1851386 | NA | other | upstream | 661887 | 29043361 ~ 29075998 (+) |
| LOC110502541 | LOC106607837 | other | upstream | 1212648 | 28497576 ~ 28571528 (+) |
| LOC110502528 | bic1a | other | upstream | 1731671 | 28001291 ~ 28078254 (+) |
| LOC110502527 | LOC106607701 | other | upstream | 1744922 | 27990245 ~ 27993189 (+) |
| G1849208 | LOC106607606 | other | upstream | 2461626 | 27274338 ~ 27276259 (+) |
| G1852590 | NA | other | downstream | 197067 | 30018490 ~ 30025046 (+) |
| G1853092 | NA | other | downstream | 984127 | 30805550 ~ 30806454 (+) |
| G1853162 | rps27a | other | downstream | 1005162 | 30826585 ~ 30834692 (+) |
| LOC110502584 | LOC106608814 | other | downstream | 1798994 | 31620398 ~ 31624184 (+) |
