Gene
RNA
| Item | Value |
|---|---|
| gene id | G1852628 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 29964221 ~ 29964445 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2120382 | True | 225 | lncRNA | 0.40 | 1 | 29964221 | 29964445 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943859 | NA | coding | upstream | 347651 | 29613252 ~ 29616570 (+) |
| LOC110502556 | NA | coding | upstream | 829368 | 29131643 ~ 29134853 (+) |
| LOC110502552 | tsn14 | coding | upstream | 1046815 | 28901697 ~ 28917406 (+) |
| LOC110502551 | LOC106607927 | coding | upstream | 1140427 | 28818971 ~ 28823794 (+) |
| LOC110502550 | LOC106607923 | coding | upstream | 1167359 | 28793894 ~ 28796862 (+) |
| si:ch1073-126c3.2 | NA | coding | downstream | 29152 | 29993597 ~ 29995811 (+) |
| gfra1a | rtgfra1 | coding | downstream | 79082 | 30043527 ~ 30144813 (+) |
| LOC110502560 | LOC106607954 | coding | downstream | 620451 | 30547124 ~ 30659333 (+) |
| LOC110502563 | LOC106607969 | coding | downstream | 702099 | 30666544 ~ 30682724 (+) |
| LOC110502565 | LOC106607988 | coding | downstream | 763943 | 30728388 ~ 30816688 (+) |
| G1852573 | NA | non-coding | upstream | 79588 | 29884415 ~ 29884633 (+) |
| G1852323 | NA | non-coding | upstream | 142798 | 29737885 ~ 29821423 (+) |
| G1852258 | LOC100380853 | non-coding | upstream | 304972 | 29659021 ~ 29659249 (+) |
| G1852257 | NA | non-coding | upstream | 306334 | 29657637 ~ 29657887 (+) |
| G1852250 | NA | non-coding | upstream | 308509 | 29655406 ~ 29655712 (+) |
| G1852630 | NA | non-coding | downstream | 441 | 29964886 ~ 29965183 (+) |
| G1852631 | NA | non-coding | downstream | 2414 | 29966859 ~ 29967132 (+) |
| G1852632 | NA | non-coding | downstream | 2768 | 29967213 ~ 29967421 (+) |
| G1853031 | NA | non-coding | downstream | 632990 | 30597435 ~ 30600086 (+) |
| G1853097 | NA | non-coding | downstream | 744308 | 30708753 ~ 30709917 (+) |
| G1851386 | NA | other | upstream | 888223 | 29043361 ~ 29075998 (+) |
| LOC110502541 | LOC106607837 | other | upstream | 1438984 | 28497576 ~ 28571528 (+) |
| LOC110502528 | bic1a | other | upstream | 1958007 | 28001291 ~ 28078254 (+) |
| LOC110502527 | LOC106607701 | other | upstream | 1971258 | 27990245 ~ 27993189 (+) |
| G1849208 | LOC106607606 | other | upstream | 2687962 | 27274338 ~ 27276259 (+) |
| G1852590 | NA | other | downstream | 54045 | 30018490 ~ 30025046 (+) |
| G1853092 | NA | other | downstream | 841105 | 30805550 ~ 30806454 (+) |
| G1853162 | rps27a | other | downstream | 862140 | 30826585 ~ 30834692 (+) |
| LOC110502584 | LOC106608814 | other | downstream | 1655972 | 31620398 ~ 31624184 (+) |
