Gene
RNA
| Item | Value |
|---|---|
| gene id | G1854117 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 29967968 ~ 29968248 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2122018 | True | 281 | lncRNA | 0.48 | 1 | 29967968 | 29968248 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528531 | NA | coding | downstream | 221000 | 29740555 ~ 29746968 (-) |
| LOC110502554 | LOC106607935 | coding | downstream | 335208 | 29121046 ~ 29632760 (-) |
| LOC110503060 | NA | coding | downstream | 986130 | 28969160 ~ 28981892 (-) |
| LOC110502553 | NA | coding | downstream | 1035368 | 28919846 ~ 28932600 (-) |
| LOC110503100 | hecd2 | coding | downstream | 1089541 | 28859178 ~ 28878427 (-) |
| LOC110502559 | LOC106607945 | coding | upstream | 185821 | 30154069 ~ 30504037 (-) |
| LOC110502561 | smek2 | coding | upstream | 715209 | 30683457 ~ 30707617 (-) |
| LOC110502562 | LOC106607983 | coding | upstream | 739573 | 30707821 ~ 30716157 (-) |
| LOC110502567 | rps27a | coding | upstream | 858339 | 30826587 ~ 30834728 (-) |
| LOC110502569 | LOC106608004 | coding | upstream | 940570 | 30908818 ~ 31010549 (-) |
| G1854111 | NA | non-coding | downstream | 6033 | 29961729 ~ 29961935 (-) |
| G1854107 | NA | non-coding | downstream | 12927 | 29954824 ~ 29955041 (-) |
| G1852487 | NA | non-coding | downstream | 188273 | 29779369 ~ 29779695 (-) |
| G1852273 | NA | non-coding | downstream | 299287 | 29668389 ~ 29668681 (-) |
| G1852263 | NA | non-coding | downstream | 306810 | 29660927 ~ 29661158 (-) |
| G1854118 | NA | non-coding | upstream | 162 | 29968410 ~ 29968703 (-) |
| G1854071 | NA | non-coding | upstream | 25387 | 29993635 ~ 29995820 (-) |
| G1854137 | NA | non-coding | upstream | 30952 | 29999200 ~ 29999405 (-) |
| G1854138 | NA | non-coding | upstream | 31305 | 29999553 ~ 29999868 (-) |
| G1854142 | NA | non-coding | upstream | 36242 | 30004490 ~ 30004946 (-) |
| G1850441 | NA | other | downstream | 1889717 | 28074925 ~ 28078251 (-) |
| G1846858 | NA | other | downstream | 4527581 | 25439807 ~ 25440387 (-) |
| LOC110502462 | LOC106607169 | other | downstream | 6622197 | 23344353 ~ 23358461 (-) |
| LOC110502461 | LOC106607165 | other | downstream | 6749698 | 23213905 ~ 23218749 (-) |
| LOC110502574 | LOC106608078 | other | upstream | 1183361 | 31151609 ~ 31239202 (-) |
| G1854905 | NA | other | upstream | 1249349 | 31217597 ~ 31218171 (-) |
| G1855326 | NA | other | upstream | 2011749 | 31979997 ~ 31981333 (-) |
| G1855821 | NA | other | upstream | 2546818 | 32515066 ~ 32515408 (-) |
| G1855822 | LOC106608363 | other | upstream | 2547501 | 32515749 ~ 32516281 (-) |
