Gene
RNA
| Item | Value |
|---|---|
| gene id | G1853156 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 30819013 ~ 30819225 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2120945 | True | 213 | lncRNA | 0.38 | 1 | 30819013 | 30819225 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502565 | LOC106607988 | coding | upstream | 2325 | 30728388 ~ 30816688 (+) |
| LOC110502563 | LOC106607969 | coding | upstream | 136289 | 30666544 ~ 30682724 (+) |
| LOC110502560 | LOC106607954 | coding | upstream | 159680 | 30547124 ~ 30659333 (+) |
| gfra1a | rtgfra1 | coding | upstream | 674200 | 30043527 ~ 30144813 (+) |
| si:ch1073-126c3.2 | NA | coding | upstream | 823202 | 29993597 ~ 29995811 (+) |
| LOC110502570 | rtn10 | coding | downstream | 55585 | 30874810 ~ 30909320 (+) |
| LOC110502572 | LOC106608074 | coding | downstream | 370125 | 31189350 ~ 31192215 (+) |
| LOC110502577 | LOC106608097 | coding | downstream | 537222 | 31356447 ~ 31380224 (+) |
| LOC110502579 | LOC106608126 | coding | downstream | 641444 | 31460669 ~ 31482046 (+) |
| LOC110502584 | LOC106608814 | coding | downstream | 801173 | 31620398 ~ 31624184 (+) |
| G1853099 | LOC106607983 | non-coding | upstream | 102883 | 30715086 ~ 30716130 (+) |
| G1853097 | NA | non-coding | upstream | 109096 | 30708753 ~ 30709917 (+) |
| G1853031 | NA | non-coding | upstream | 218927 | 30597435 ~ 30600086 (+) |
| G1852632 | NA | non-coding | upstream | 851592 | 29967213 ~ 29967421 (+) |
| G1852631 | NA | non-coding | upstream | 851881 | 29966859 ~ 29967132 (+) |
| G1853161 | NA | non-coding | downstream | 5842 | 30825067 ~ 30825321 (+) |
| G1853162 | rps27a | non-coding | downstream | 7360 | 30826585 ~ 30834692 (+) |
| G1853168 | NA | non-coding | downstream | 18378 | 30837603 ~ 30837806 (+) |
| G1853170 | NA | non-coding | downstream | 20373 | 30839598 ~ 30839817 (+) |
| G1853176 | NA | non-coding | downstream | 28904 | 30848129 ~ 30848489 (+) |
| G1853092 | NA | other | upstream | 12559 | 30805550 ~ 30806454 (+) |
| G1852590 | NA | other | upstream | 793967 | 30018490 ~ 30025046 (+) |
| G1851386 | NA | other | upstream | 1743015 | 29043361 ~ 29075998 (+) |
| LOC110502541 | LOC106607837 | other | upstream | 2293776 | 28497576 ~ 28571528 (+) |
| morn2 | morn2 | other | downstream | 1048639 | 31866319 ~ 31869743 (+) |
| LOC110502602 | LOC106608363 | other | downstream | 1683144 | 32489267 ~ 32530254 (+) |
| G1855733 | NA | other | downstream | 1689013 | 32508238 ~ 32509474 (+) |
