Gene
RNA
| Item | Value |
|---|---|
| gene id | G1854772 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 31001046 ~ 31006050 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2122728 | True | 372 | lncRNA | 0.48 | 2 | 31001046 | 31006050 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502567 | rps27a | coding | downstream | 166318 | 30826587 ~ 30834728 (-) |
| LOC110502562 | LOC106607983 | coding | downstream | 284889 | 30707821 ~ 30716157 (-) |
| LOC110502561 | smek2 | coding | downstream | 293429 | 30683457 ~ 30707617 (-) |
| LOC110502559 | LOC106607945 | coding | downstream | 497009 | 30154069 ~ 30504037 (-) |
| LOC110528531 | NA | coding | downstream | 1254078 | 29740555 ~ 29746968 (-) |
| LOC110502571 | LOC106608059 | coding | upstream | 9490 | 31015540 ~ 31140532 (-) |
| LOC110502574 | LOC106608078 | coding | upstream | 145599 | 31151609 ~ 31239202 (-) |
| LOC110502576 | znt6 | coding | upstream | 249021 | 31255071 ~ 31337901 (-) |
| LOC110503101 | LOC106608102 | coding | upstream | 417177 | 31423227 ~ 31437297 (-) |
| LOC110502582 | NA | coding | upstream | 513904 | 31519954 ~ 31557450 (-) |
| G1854770 | NA | non-coding | downstream | 1455 | 30999367 ~ 30999591 (-) |
| G1854763 | NA | non-coding | downstream | 17745 | 30982987 ~ 30983301 (-) |
| G1854761 | NA | non-coding | downstream | 20473 | 30980023 ~ 30980573 (-) |
| G1854752 | NA | non-coding | downstream | 31454 | 30969372 ~ 30969592 (-) |
| G1854750 | NA | non-coding | downstream | 34611 | 30966208 ~ 30966435 (-) |
| LOC110502569 | LOC106608004 | non-coding | upstream | 2721 | 30908818 ~ 31010549 (-) |
| G1854791 | NA | non-coding | upstream | 52247 | 31058297 ~ 31082645 (-) |
| G1854862 | NA | non-coding | upstream | 184930 | 31190980 ~ 31191669 (-) |
| G1854898 | NA | non-coding | upstream | 201944 | 31207994 ~ 31208233 (-) |
| G1854906 | NA | non-coding | upstream | 212211 | 31218261 ~ 31218500 (-) |
| LOC110502553 | NA | other | downstream | 2068501 | 28919846 ~ 28932600 (-) |
| G1850441 | NA | other | downstream | 2922795 | 28074925 ~ 28078251 (-) |
| G1846858 | NA | other | downstream | 5560659 | 25439807 ~ 25440387 (-) |
| LOC110502462 | LOC106607169 | other | downstream | 7655275 | 23344353 ~ 23358461 (-) |
| LOC110502461 | LOC106607165 | other | downstream | 7782776 | 23213905 ~ 23218749 (-) |
| G1854905 | NA | other | upstream | 211547 | 31217597 ~ 31218171 (-) |
| G1855326 | NA | other | upstream | 973947 | 31979997 ~ 31981333 (-) |
| G1855821 | NA | other | upstream | 1509016 | 32515066 ~ 32515408 (-) |
| G1855822 | LOC106608363 | other | upstream | 1509699 | 32515749 ~ 32516281 (-) |
