XLOC_037687 (ankzf1)


Basic Information

Item Value
gene id XLOC_037687
gene name ankzf1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 12834414 ~ 12888157 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074012
CAGCacgcaagcaaaaagagaaagagCAAAAAGAAGAGAAAGTAAAGAAACAGCAAGAAGAGGAGGAAAAGAAGAGGTTCACAGCTCTCAGTGACAGAGAAAAGCGAGCTTTGGCTGCAGAGAGGAGATTGGCTGAACATCTGGCCACGACTGGAGGAGCACTAAACAACATAAGGAGATGTTTTCTGTGTGGAGAGTCGTTGCTGGGGAAGATTCCTTTTGAATATCTGGATTACTCTTTCTGCACGCCTCGCTGTGTTCAAGCCCACCGTAAAGCCAATGCTGCAGCGCGGCCCTGACCTCTCATGTCCCCACACACACAGCAGAGGAACATGTTTTATAACACAATCTTCAGGAAGTTTAAGGGGAGGAATGAGTGAATAACCTCCGCAGACCCTGAAGAATGAGGAATGGTATGTTATGTTGCACAATGATTCACTGCAGAGGCTGCCAGAAGAGGTTTGCTTCTGAAATGTCCACCAAACATTATC
>TCONS_00074013
ACCGTAGACGTATACGAACACAACCACATGTGTAACTTAATATGATTCATTTAAACTTAATCGGACTAAAATCATCTGATGGTTCTGGCAAAAagTGATAGCTTGTTTTGTCTGCTGAGTCATGTCCTCGTCTCCCGAGCTGCGGAGTGTGTTCACTCTGTGTGGCGACCAGACGGTGTCTTGTGGGCTGAGGGAAGTGTCTGCCCTGCTGGACCAGACTGACCCTCCACAGCCTATCCCATACACCGAAGATGCTGTACCGAGGAAGACCATGTCTGCTGGTGAGGTGTCGGACAGGATGTTCTGCCATGCATGTCAGTGCCCTTTTGAGAGtcgcgaggagcagATGGAGCACTATAAACTTGACTGGCACCGCTTCAACCTGAGACAACGGCTGGAAGGAAGATCAGCGGTCACAGTGGAGGAGTTTGAGAAGAAAACTGGCACAGGTGACATCTCAAGTATTTCAGGCTCAGACAGTTCGGATAGTGAGGATGGCGACCTTGGAGATGAAGTGGCCCCTGTGCAGACGGACTGTGCTCTGGACACAGATCAGCCTCAGAGTCGACTTTCTGCCAAAGTTGTCTTCCAAAACGCAGAGGGCCAGTTCCTGTCACTGTATCGCTGCATTCTGCAAAGCAAAAAAGACAACGAAGAAGACTTGGTTTCTTCTTTACtgaaaatctccaataacactgTTTGGGTTATTCTGATGACTGGTGGGGGACACTTTGCTGGAGCAGTTTTTAAGGGAAAAGAGATTCTGCAGCACAAGACCTTCCACCGGTACACTGTGAGAGCGAAGCGAGGGACGGCGCAGGGACTGAGGGACTCGCAGAACCGCAGCCACACGCCCAAATCTGCAGGTGCAGCTCTTAGGAGATACAATGAGGCAGCGCTCCACAAGgaTATTCATGACCTTCTGGAAAGCTGGGTTGATTATTTGAAGGAGGCCAGTGCCATCTTCCTACGAGCACCAAGTTACAACAAGACCATATTTTTTGGAGGTCGTGGAGCACCGTTGGACAAAAAAGATCAGCGAATGCGCATACTTCCTTTTGCCACACGTAGAGCCACATTTAGTGAAGTAAAGCGTGTCTTTGACCTGCTCTCGACCCTACATGTTTATCAAAAAGAGACTGAAATCTCCAGTATTCTTAGTCCATCAAGGAGATTGTGGAAGAAGAAAACTCCTAAACCTGTTAGTCATCCAGTACCAAACACTAATGTGCCAGCAGAGGGAGAAGATGCTAAAGAAGAAAGTTCAGGAGAAGATGATTCAGGAACACTAGAGACTGTGGAGGTGACGCTGGGAACTTTGGTCCTGAGAGAACACGAGATCTATCCTAATAAGAAGAAAAGGAGGAAGCGGAAAGAGAAAAGAGAAGACTCAAGCAGTCGAGAAACAAATGAAGATAAGGCAGATGATGAAAATATGGACGAAGGTGAACTGGAAGTTGAAAGTGACTCTAAAGAGATGCAGAGGAAGTCAAGGGGCAGAAGGAAACCCAAAGGCAAAAAACCTCAGCCTGAAGAGGATGAAGTGGATGAGTCTTGGGAGTACAGTTTAAGGGATGCTCTCTACACTGCCTGTAAAACTGGAGACATCCAGTCATTGCGCAGCCTCCTTCATCTACCGGAGGACGAAGAGAGCAGAAGAGAGAGAACCACTGAAGAAGATCCTGCTTCACAGAGTTCAGATCTTCTCAACAAGCCCATAGACTCAGCAGGCTTCACTTTACTGCACGTGGCTTCAGCAGCCGGACAGAAGTCTGTCATCAGACTGCTAATGGATGCAGGGAGTGATCCGGCCAACAAGACTAAAAAAGGACAGACTCCATATGGTGTCGCTCCTGAAAAGGATACAAGAAACGTGTTTAGAAAATACATGGCTGAACACCCTCATAAATATGACTACACAAAAGCACAGGTTCCTGGACCGCTAACCGAAGATATAGAGTCCAAAAAAGCAGAAAAGAAGAAAGCCCAAAAAGCAGCacgcaagcaaaaagagaaagagCAAAAAGAAGAGAAAGTAAAGAAACAGCAAGAAGAGGAGGAAAAGAAGAGGTTCACAGCTCTCAGTGACAGAGAAAAGCGAGCTTTGGCTGCAGAGAGGAGATTGGCTGAACATCTGGCCACGACTGGAGGAGCACTAAACAACATAAGGAGATGTTTTCTGTGTGGAGAGTCGTTGCTGGGGAAGATTCCTTTTGAATATCTGGATTACTCTTTCTGCACGCCTCGCTGTGTTCAAGCCCACCGTAAAGCCAATGCTGCAGCGCGGCCCTGACCTCTCATGTCCCCACACACACAGCAGAGGTACTATTGATCAAACGAAGGTGCATTACTATATTCTGGACACATTTCACCTCAGTTGACTGTTAGTTTTACTGTTAATATATGATGGATTTCTCACAGTTGGCTTGGACAAAGAAGAGACTATAAAAATGACTTAATggagaattattaataaatcatgaaTGTTGATGAGCACACAATAGGCATATATTAGAGTAAACCATGTCAGTGGCTAGTATCTGttgtttagcatgtttttaacttTTCAGACCAACCACTGTGATTCTATAAATCTAAATCTCCATTTACACatgaaataagaaaaacaattaaaaataatgcaGAACTGTAAAA
>TCONS_00074014
GACTATAGAGTCAAAGCAAGCTCTTCTGAGGAGTTTGCAGACAGAGGAAAGCAGTCTGCTGGAGCAGGAGTGTAATCTGAAACTCAAGCGTGAGCAGCTGAAGAAAGCGGTTGATGCATATTCAAACTTAGAACAAGGTTCACAGGTGAATTCAGTGAAACCGGGCTCATCCAGCCAGAGTAAGACTACTGACAAGACTGTGAGAAAAAGAGGAGCACGCAAGTGAACACAACACaaaaattcaatatttatttttagcaaattTAACTTGCAATAAACATGAGGAAATAATAACCCTTGTGCAATGTATTGTGTCATTTGATGAAATCATTCTAAAAGGAAGTGATAATTCAACTTCAATGCTAAAGAGAAATCTTAAAGGTatcataaaaagaaaataatttacttgcatgttttttttccaaactgacacgactttatttttttctgtagaatttttactttgttaaacatttatatcatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtgtgtgtgaaatacATCTGAAAAGGAATCAAGCACATGcaacaataaaaacatacaatgacagttttacacatatacacaaataatTCCCATGTAACatttacttgtttttgttttagctttTGTATTAAGGCAAATTAAAGGCCAGTCAATTTTATATGTATAACACTAATAATTTAATTGAAGGTTTGAtacaagtaaagggtgaataaattgtgatagaatttttgttttgggtgaactatctctttaacgcACACTGATCCGAACATACGCGTTCGCGCCGTAGTGTAATGATGACACTTGTCGGCCACCGTAGACGTATACGAACACAACCACATGTGTAACTTAATATGATTCATTTAAACTTAATCGGACTAAAATCATCTGATGGTTCTGGCAAAAagTGATAGCTTGTTTTGTCTGCTGAGTCATGTCCTCGTCTCCCGAGCTGCGGAGTGTGTTCACTCTGTGTGGCGACCAGACGGTGTCTTGTGGGCTGAGGGAAGTGTCTGCCCTGCTGGACCAGACTGACCCTCCACAGCCTATCCCATACACCGAAGATGCTGTACCGAGGAAGACCATGTCTGCTGGTGAGGTGTCGGACAGGATGTTCTGCCATGCATGTCAGTGCCCTTTTGAGAGtcgcgaggagcagATGGAGCACTATAAACTTGACTGGCACCGCTTCAACCTGAGACAACGGCTGGAAGGAAGATCAGCGGTCACAGTGGAGGAGTTTGAGAAGAAAACTGGCACAGGTGACATCTCAAGTATTTCAGGCTCAGACAGTTCGGATAGTGAGGATGGCGACCTTGGAGATGAAGTGGCCCCTGTGCAGACGGACTGTGCTCTGGACACAGATCAGCCTCAGAGTCGACTTTCTGCCAAAGTTGTCTTCCAAAACGCAGAGGGCCAGTTCCTGTCACTGTATCGCTGCATTCTGCAAAGCAAAAAAGACAACGAAGAAGACTTGGTTTCTTCTTTACtgaaaatctccaataacactgTTTGGGTTATTCTGATGACTGGTGGGGGACACTTTGCTGGAGCAGTTTTTAAGGGAAAAGAGATTCTGCAGCACAAGACCTTCCACCGGTACACTGTGAGAGCGAAGCGAGGGACGGCGCAGGGACTGAGGGACTCGCAGAACCGCAGCCACACGCCCAAATCTGCAGGTGCAGCTCTTAGGAGATACAATGAGGCAGCGCTCCACAAGgaTATTCATGACCTTCTGGAAAGCTGGGTTGATTATTTGAAGGAGGCCAGTGCCATCTTCCTACGAGCACCAAGTTACAACAAGACCATATTTTTTGGAGGTCGTGGAGCACCGTTGGACAAAAAAGATCAGCGAATGCGCATACTTCCTTTTGCCACACGTAGAGCCACATTTAGTGAAGTAAAGCGTGTCTTTGACCTGCTCTCGACCCTACATGTTTATCAAAAAGAGACTGAAATCTCCAGTATTCTTAGTCCATCAAGGAGATTGTGGAAGAAGAAAACTCCTAAACCTGTTAGTCATCCAGTACCAAACACTAATGTGCCAGCAGAGGGAGAAGATGCTAAAGAAGAAAGTTCAGGAGAAGATGATTCAGGAACACTAGAGACTGTGGAGGTGACGCTGGGAACTTTGGTCCTGAGAGAACACGAGATCTATCCTAATAAGAAGAAAAGGAGGAAGCGGAAAGAGAAAAGAGAAGACTCAAGCAGTCGAGAAACAAATGAAGATAAGGCAGATGATGAAAATATGGACGAAGGTGAACTGGAAGTTGAAAGTGACTCTAAAGAGATGCAGAGGAAGTCAAGGGGCAGAAGGAAACCCAAAGGCAAAAAACCTCAGCCTGAAGAGGATGAAGTGGATGAGTCTTGGGAGTACAGTTTAAGGGATGCTCTCTACACTGCCTGTAAAACTGGAGACATCCAGTCATTGCGCAGCCTCCTTCATCTACCGGAGGACGAAGAGAGCAGAAGAGAGAGAACCACTGAAGAAGATCCTGCTTCACAGAGTTCAGATCTTCTCAACAAGCCCATAGACTCAGCAGGCTTCACTTTACTGCACGTGGCTTCAGCAGCCGGACAGAAGTCTGTCATCAGACTGCTAATGGATGCAGGGAGTGATCCGGCCAACAAGACTAAAAAAGGACAGACTCCATATGGTGTCGCTCCTGAAAAGGATACAAGAAACGTGTTTAGAAAATACATGGCTGAACACCCTCATAAATATGACTACACAAAAGCACAGGTTCCTGGACCGCTAACCGAAGATATAGAGTCCAAAAAAGCAGAAAAGAAGAAAGCCCAAAAAGCAGCacgcaagcaaaaagagaaagagCAAAAAGAAGAGAAAGTAAAGAAACAGCAAGAAGAGGAGGAAAAGAAGAGGTTCACAGCTCTCAGTGACAGAGAAAAGCGAGCTTTGGCTGCAGAGAGGAGATTGGCTGAACATCTGGCCACGACTGGAGGAGCACTAAACAACATAAGGAGATGTTTTCTGTGTGGAGAGTCGTTGCTGGGGAAGATTCCTTTTGAATATCTGGATTACTCTTTCTGCACGCCTCGCTGTGTTCAAGCCCACCGTAAAGCCAATGCTGCAGCGCGGCCCTGA
>TCONS_00074015
AGTATTCTTAGTCCATCAAGGAGATTGTGGAAGAAGAAAACTCCTAAACCTGTTAGTCATCCAGTACCAAACACTAATGGCTGTTTTGTGGTCAGTGCCAGCAGAGGGAGAAGATGCTAAAGAAGAAAGTTCAGGAGAAGATGATTCAGGAACACTAGAGACTGTGGAGGTGACGCTGGGAACTTTGGTCCTGAGAGAACACGAGATCTATCCTAATAAGAAGAAAAGGAGGAAGCGGAAAGAGAAAAGAGAAGACTCAAGCAGTCGAGAAACAAATGAAGATAAGGCAGATGATGAAAATATGGACGAAGGTGAACTGGAAGTTGAAAGTGACTCTAAAGAGATGCAGAGGAAGTCAAGGGGCAGAAGGAAACCCAAAGGCAAAAAACCTCAGCCTGAAGAGGATGAAGTGGATGAGTCTTGGGAGTACAGTTTAAGGGATGCTCTCTACACTGCCTGTAAAACTGGAGACATCCAGTCATTGCGCAGCCTCCTTCATCTACCGGAGGACGAAGAGAGCAGAAGAGAGAGAACCACTGAAGAAGATCCTGCTTCACAGAGTTCAGATCTTCTCAACAAGCCCATAGACTCAGCAGGCTTCACTTTACTGCACGTGGCTTCAGCAGCCGGACAGAAGTCTGTCATCAGACTGCTAATGGATGCAGGGAGTGATCCGGCCAACAAGACTAAAAAAGGACAGACTCCATATGGTGTCGCTCCTGAAAAGGATACAAGAAACGTGTTTAGAAAATACATGGCTGAACACCCTCATAAATATGACTACACAAAAGCACAGGTTCCTGGACCGCTAACCGAAGATATAGAGTCCAAAA
>TCONS_00074016
CAGTTCATGTTCATGCGATTGTTTCTGCATGTTGTTTTTCCGTTATCattttaatgattcactgatttattaatgttagtcttgaataatacaaataatatatttatataagtttTAACTGAACAGATGAACATTAAAATTCGATATAAACGGAGTCTAATTAGTATGTATCATCCAATCAGATGTTACTCAATCAAATTACTTATTAGTAATCACGCGTTGAGTCGAGCGAAAGTTGTTTATCGTTACCAAAAAGTAAAATCGGGTTGTGTGAGAAAACGTGCTTTGGAGTAATGAAGACCCCACAAAACTCTTTAAACGTCACGTTTCAGGACGATAAAGAAATACAGGATTTGTCAAAACAGCTTGAGGACGCCAAAACAGAACTACAGCTTACTAATGATGAGGTGGAGCGAGTAAATAAAGACGTTAACAAATGCAGAGAAGAGCTGGAccagaggatgatgatgatggtccaaaAAGACGAAGGCCTGTGTAATTCGTTACTTGAGCTGGATGCCATCATGCAGGAGAAGAAACATCTCATCAGTCAGTTGGAAGAATTTACTTTGTCTGGGACTATAGAGTCAAAGCAAGCTCTTCTGAGGAGTTTGCAGACAGAGGAAAGCAGTCTGCTGGAGCAGGAGTGTAATCTGAAACTCAAGCGTGAGCAGCTGAAGAAAGCGGTTGATGCATATTCAAACTTAGAACAAGGTTCACAGGTGAATTCAGTGAAACCGGGCTCATCCAGCCAGAGTAAGACTACTGACAAGACTGTGAGAAAAAGAGGAGCACGCAAGTGAACACAACACaaaaattcaatatttatttttagcaaattTAACTTGCAATAAACATGAGGAAATAATAA
>TCONS_00074017
atccgggctcttGCGTTCTACTCATCAGGCGGAAATCACAATAGTGCGGATGAAGCTGTGCCCCATTTTTTCACAGAGAAGAGCTGGAccagaggatgatgatgatggtccaaaAAGACGAAGGCCTGTGTAATTCGTTACTTGAGCTGGATGCCATCATGCAGGAGAAGAAACATCTCATCAGTCAGTTGGAAGAATTTACTTTGTCTGGGACTATAGAGTCAAAGCAAGCTCTTCTGAGGAGTTTGCAGACAGAGGAAAGCAGTCTGCTGGAGCAGGAGTGTAATCTGAAACTCAAGCGTGAGCAGCTGAAGAAAGCGGTTGATGCATATTCAAACTTAGAACAAGGTTCACAGGTGAATTCAGTGAAACCGGGCTCATCCAGCCAGAGTAAGACTACTGACAAGACTGTGAGAAAAAGAGGAGCACGCAAGTGAACACAACACaaaaattcaatatttatttttagcaaattTAACTTGCAATAAACATGAGGAAATAA
>TCONS_00074018
TCGAGCGAAAGTTGTTTATCGTTACCAAAAAGTAAAATCGGGTTGTGTGAGAAAACGTGCTTTGGAGTAATGAAGACCCCACAAAACTCTTTAAACGTCACGTTTCAGGACGATAAAGAAATACAGGATTTGTCAAAACAGCTTGAGGACGCCAAAACAGAACTACAGCTTACTAATGATGAGGTGGAGCGAGTAAATAAAGACGTTAACAAATGAGAAGAGCTGGAccagaggatgatgatgatggtccaaaAAGACGAAGGCCTGTGTAATTCGTTACTTGAGCTGGATGCCATCATGCAGGAGAAGAAACATCTCATCAGTCAGTTGGAAGAATTTACTTTGTCTGGGACTATAGAGTCAAAGCAAGCTCTTCTGAGGAGTTTGCAGACAGAGGAAAGCAGTCTGCTGGAGCAGGAGTGTAATCTGAAACTCAAGCGTGAGCAGCTGAAGAAAGCGGTTGATGCATATTCAAACTTAGAACAAGGTTCACAGGTGAATTCAGTGAAACCGGGCTCATCCAGCCAGAGTAAGACTACTGACAAGACTGTGAGAAAAAGAGGAGCACGCAAGTGAACACAACACaaaaattcaatatttatttttagcaaattTAACTTGCAATAAACATGAGGAAA

Function

symbol description
ankzf1 Predicted to enable metal ion binding activity. Predicted to be involved in ubiquitin-dependent ERAD pathway. Predicted to be located in cytoplasm. Orthologous to human ANKZF1 (ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1).

GO:

id name namespace
GO:0072671 mitochondria-associated ubiquitin-dependent protein catabolic process biological_process
GO:0030433 ubiquitin-dependent ERAD pathway biological_process
GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system biological_process
GO:0036266 Cdc48p-Npl4p-Vms1p AAA ATPase complex cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-050309-80 Predicted to enable metal ion binding activity. Predicted to be involved in ubiquitin-dependent ERAD pathway. Predicted to be located in cytoplasm. Orthologous to human ANKZF1 (ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1).
ZDB-GENE-070912-145 No description available

Ensembl:

ensembl_id ENSDARG00000041904 ENSDARG00000095504

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074012 False 491 mRNA 0.47 4 12834414 12870537
TCONS_00074013 False 2655 mRNA 0.46 16 12868047 12885201
TCONS_00074014 False 3131 mRNA 0.44 17 12868409 12886108
TCONS_00074015 False 833 mRNA 0.45 6 12870565 12874774
TCONS_00074016 False 871 mRNA 0.37 5 12885746 12888082
TCONS_00074017 False 502 mRNA 0.43 4 12885749 12888157
TCONS_00074018 True 638 nonsense_mediated_decay 0.41 5 12885752 12887858

Neighbor

gene id symbol gene type direction distance location
XLOC_037686 myo10l3 coding downstream 22478 12664373 ~ 12811936 (-)
XLOC_037685 pttg1ipb coding downstream 175274 12655278 ~ 12659140 (-)
XLOC_037684 sumo3b coding downstream 181430 12648705 ~ 12652984 (-)
XLOC_037683 tspearb coding downstream 209029 12596038 ~ 12625385 (-)
XLOC_037682 tra2b coding downstream 239411 12579077 ~ 12595003 (-)
XLOC_037688 NA coding upstream 1741 12889898 ~ 12903013 (-)
XLOC_037689 NA coding upstream 57400 12945557 ~ 12948957 (-)
XLOC_037690 NA coding upstream 66410 12954567 ~ 12956248 (-)
XLOC_037691 NA coding upstream 209064 13097221 ~ 13120257 (-)
XLOC_037692 NA coding upstream 357867 13246024 ~ 13246524 (-)
XLOC_037677 NA non-coding downstream 662629 12076843 ~ 12171785 (-)
XLOC_037675 NA non-coding downstream 979109 11822379 ~ 11855305 (-)
XLOC_037673 NA non-coding downstream 1179383 11595987 ~ 11655031 (-)
XLOC_037671 NA non-coding downstream 1262060 11571312 ~ 11572354 (-)
XLOC_037667 BX000444.1 non-coding downstream 1987865 10845918 ~ 10846549 (-)

Expression


Co-expression Network