Gene
RNA
| Item | Value |
|---|---|
| gene id | G1853990 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 32117306 ~ 32138022 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2121882 | True | 228 | lncRNA | 0.43 | 2 | 32117306 | 32138022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502597 | LOC106608325 | coding | upstream | 141270 | 31969957 ~ 31976036 (+) |
| LOC110503062 | arhgef33 | coding | upstream | 225773 | 31871734 ~ 31891533 (+) |
| morn2 | morn2 | coding | upstream | 247563 | 31866319 ~ 31869743 (+) |
| LOC110502586 | LOC100196543 | coding | upstream | 398356 | 31653358 ~ 31718950 (+) |
| LOC110502584 | LOC106608814 | coding | upstream | 493122 | 31620398 ~ 31624184 (+) |
| mrps5 | LOC106608355 | coding | downstream | 310764 | 32448786 ~ 32474652 (+) |
| LOC110502602 | LOC106608363 | coding | downstream | 351245 | 32489267 ~ 32530254 (+) |
| LOC110502603 | LOC106608383 | coding | downstream | 434424 | 32572446 ~ 32646173 (+) |
| LOC118943948 | NA | coding | downstream | 436819 | 32574841 ~ 32574893 (+) |
| LOC110502609 | ppa1 | coding | downstream | 845450 | 32983472 ~ 33000172 (+) |
| G1853966 | NA | non-coding | upstream | 36338 | 32080471 ~ 32080968 (+) |
| G1853944 | LOC106608331 | non-coding | upstream | 76831 | 32036230 ~ 32040475 (+) |
| G1853917 | NA | non-coding | upstream | 121453 | 31995651 ~ 31995853 (+) |
| G1853871 | NA | non-coding | upstream | 135087 | 31978665 ~ 31982219 (+) |
| G1853856 | LOC106608247 | non-coding | upstream | 215736 | 31900379 ~ 31901570 (+) |
| G1854048 | NA | non-coding | downstream | 70039 | 32208061 ~ 32208946 (+) |
| G1855502 | NA | non-coding | downstream | 117680 | 32255702 ~ 32256157 (+) |
| G1855527 | NA | non-coding | downstream | 139113 | 32277135 ~ 32277388 (+) |
| G1855559 | NA | non-coding | downstream | 162694 | 32300716 ~ 32300936 (+) |
| G1855571 | LOC100136012 | non-coding | downstream | 173743 | 32311765 ~ 32312163 (+) |
| G1853162 | rps27a | other | upstream | 1284863 | 30826585 ~ 30834692 (+) |
| G1853092 | NA | other | upstream | 1310852 | 30805550 ~ 30806454 (+) |
| LOC110502560 | LOC106607954 | other | upstream | 1464090 | 30547124 ~ 30659333 (+) |
| G1855733 | NA | other | downstream | 370216 | 32508238 ~ 32509474 (+) |
| G1855723 | NA | other | downstream | 380905 | 32518927 ~ 32519677 (+) |
| G1856094 | LOC106577218 | other | downstream | 799885 | 32937907 ~ 32942047 (+) |
| wnt8b | LOC106608511 | other | downstream | 1089811 | 33227748 ~ 33236137 (+) |
