G1855770



Basic Information


Item Value
gene id G1855770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 32480559 ~ 32480917 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2123801
cggggtggatgggtgaGCATTAGTGAGTTAGctaaattcgtaacatatcatacgttttgcaaattagTAAGCTATCATACCTtctgcaaattcataacatattgtacatttttcaAATTCGTAACATACAATATGAATTCTAattagtaacatatcatacgaaattgGTGAAGGACACCcaaaaatgaatacataccatatgaaacctAACATATCATACTGATTGGGGTGTCTCGGATTTGATGTTTGAAATGAATTATGCCTACTCAAATGTGtctactttcagcaccatgagcgGTCCTTTTCCGATTTATTTGTGCCACGGCTGCCGCTTCCATTTTCAGGACCACAATGTAAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2123801 True 359 lncRNA 0.36 1 32480559 32480917

Neighbor


gene id symbol gene type direction distance location
LOC110502600 LOC106608331 coding downstream 241261 32036219 ~ 32239298 (-)
LOC110502599 NA coding downstream 495991 31982805 ~ 31984568 (-)
LOC110502596 LOC106608247 coding downstream 521113 31891979 ~ 31959446 (-)
LOC110503102 NA coding downstream 614623 31855932 ~ 31865936 (-)
galm galm coding downstream 626190 31831380 ~ 31854369 (-)
LOC110502604 LOC106608394 coding upstream 172418 32653335 ~ 32858193 (-)
LOC110502606 LOC102780737 coding upstream 457004 32937921 ~ 32944288 (-)
LOC110502608 eif4ebp2 coding upstream 488600 32969517 ~ 32975875 (-)
LOC110503103 LOC106608472 coding upstream 557753 33038670 ~ 33141219 (-)
dnajb12a LOC106608494 coding upstream 672956 33153873 ~ 33166327 (-)
G1855785 NA non-coding downstream 2430 32430963 ~ 32478129 (-)
G1855795 LOC106608355 non-coding downstream 5912 32474047 ~ 32474647 (-)
G1855793 NA non-coding downstream 32626 32446779 ~ 32447933 (-)
G1855783 NA non-coding downstream 52160 32427865 ~ 32428399 (-)
G1855782 NA non-coding downstream 54375 32425958 ~ 32426184 (-)
G1855808 NA non-coding upstream 7075 32487992 ~ 32488206 (-)
G1855812 NA non-coding upstream 16388 32497305 ~ 32497929 (-)
G1855813 NA non-coding upstream 17171 32498088 ~ 32498409 (-)
G1855816 NA non-coding upstream 22120 32503037 ~ 32503301 (-)
G1855818 NA non-coding upstream 24032 32504949 ~ 32505156 (-)
G1855326 NA other downstream 499226 31979997 ~ 31981333 (-)
G1854905 NA other downstream 1262388 31217597 ~ 31218171 (-)
LOC110502574 LOC106608078 other downstream 1290963 31151609 ~ 31239202 (-)
LOC110502553 NA other downstream 3548014 28919846 ~ 28932600 (-)
G1850441 NA other downstream 4402308 28074925 ~ 28078251 (-)
G1855821 NA other upstream 34149 32515066 ~ 32515408 (-)
G1855822 LOC106608363 other upstream 34832 32515749 ~ 32516281 (-)
G1856217 NA other upstream 156508 32637425 ~ 32646140 (-)
LOC110502621 LOC106608559 other upstream 1115241 33590457 ~ 33601995 (-)
kcnma1a LOC106613356 other upstream 1696140 34177056 ~ 34469529 (-)

Expression



Co-expression Network