XLOC_037694 (fzd7a)


Basic Information

Item Value
gene id XLOC_037694
gene name fzd7a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 13352308 ~ 13355071 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074020
CTCACTTGCGCTCAAACCTTCCAGTCAGTGGGAAGCGCGTCTACTGAGCGCACGCGAGGCGAGCGAGGAAACCGCACTCTGTTCAAGACAACCAACTGAAGTTTTCCAGCAGACTCACGACTCTCTGAAACACAGCTCGAAAGTCACTGGATGCACAGCGGGATTCGGAGAGCAAGGGAAACTTTAAACAGCAGTCGAAAGATTCTCTCCAGACGCTTGAAGAATAACACAACGATGCGCGCGGTGTGGATTTAGTTTGGATGTATTTTCGGACTTTCTAAAAGGGGGTTTCTCCACATATCCACTCGTTTGCCTAGCATGATCGCTTTCAGACAACGAGAGCTATAAAGGGAGCTCAGACGAGGAGGTTTTTGTTGGTTTATTCGCAAACGAACAATCCACAGAAACTTTTTCTTTCTTGCGGAGCAACCGCAGCAGCTTCGTTTCATTCGGACCGAATCCAAAACAAATGGCTTTCCTCAAAATGCAACACTGTTGTGGAATTACTCGTTATTTTCTTCTCCTTTTCACTGTGGCTCTACAAACGACCAGCGGTCAGTATCACGGAGAAAAGGGCATCTCCATACCCGAGCACGGCTTCTGCCAGCCTATATCTATACCTCTCTGTACGGACATCGCCTACAACCAGACCATTATGCCGAATCTTTTGGGACACACCAACCAGGAGGACGCCGGTCTCGAAGTGCACCAGTTCTATCCCCTAGTAAAAGTGCAGTGCTCCATGGACCTGAAGTTCTTCCTGTGCTCCATGTACGCGCCGGTTTGCACGGTGCTCGAGCAAGCCATCCCGCCGTGTCGGTCCCTTTGCGAGCGCGCGAGACAGGGCTGCGAGGCCCTCATGAACAAGTTCGGCTTCCAGTGGCCCGAGCGGCTGCGCTGCGAGAATTTCCCGGTGCACGGCGCGGGTGAGATCTGCGTGGGCCAGAACACCTCGGACGCGGGGAGCCCCACTTCAAACCCGACGCCCTACGTCCCAGAACTGATTACATTACAGCCAAACCTGGTGGTCAGACCCAACCAGCAATTCACATGCCCGCTGCAACTCAAAGTGCCCACTTATCTGAAGTACCACTTTATGGGCGAAAAGGACTGCGGGGCGCCATGCGAGCCCACTAGACCCAACGGACTGATGTATTTCAGAGAGGAAGAAGTCAAATTCGGTCGCCTCTGGGTCGGCATTTGGTCAATTTTGTGCTGTGTTAGCACTTTGTTCACCGTCCTCACTTATTTAGTGGACATGAGGCGGTTTCGTTACCCGGAGAGGCCCATCATCTTCCTGTCCGGCTGTTACTTCATGGTGGCCGTTGCATATGCAGCTGGATTTTTCCTCGAAGACAAAGTCGTTTGCATCGACAAATTCAGCGACGACGGTTATAAAACCGTCGCGCAAGGCACGAAAAAAGAGGGTTGCACCATCCTCTTCATGATTCTCTACTTCTTCGGGATGGCGAGTTCAATCTGGTGGGTCATTTTATCTCTTACATGGTTTCTCTCAGCGGGCATGAAGTGGGGTCATGAAGCCATTGAGGCGAACTCTCAGTATTTCCACCTCGCCGCGTGGGCAGTTCCTGCGGTTAAAACCATCACCATCCTTGCCATGGGCCAAGTGGATGGCGACATGCTCACCGGGGTTTGCTACGTTGGCATCTACAACGTGGACTCTCTGCGCGGCTTCGTCCTGGCGCCCCTCTTCGTCTACCTCTTCATCGGTACCTCATTTCTCCTAGCCGGCTTCGTGTCGCTTTTCCGCATCAGAACCATCATGAAGCACGACGGCACCAAGACGGAGAAGCTGGAGAAGCTGATGGTGCGCATCGGCGTGTTCAGCGTGCTCTACACGGTGCCCGCCACTATCGTGATCGCCTGCTACTTCTACGAGCAGGCTTTCCGAGAGCAGTGGGAGAAGACCTGGCACATGCAGACGTGCAAGAGATTCGCGGTTCCCTGCCCGGTTAACAACTTCGCCCCCATGTCTCCAGACTTCACCGTATTCATGATCAAATACCTGATGACCATGATCGTAGGGATCACCTCTGGATTTTGGATATGGTCTGGAAAAACTCTGCAGTCGTGGCGCAGGTTTTATAAACGGCTCAGCAACAGCAACCAGGGCGAGACGACGGTATGAGAAAAAGAGCGATCGTTTTCGGTCATGCTTTGGCTGAATGTCTCGTGCGGACTGTTACGCGGAGAGAGACTTGTTGAGTGAGTTTTGCGGACACTACTGTGCGTGGAAACAAACGGAGCCTCATGAACAGTGTTATCAGCCCGAGTCTGTTTAACCATTGGGTTTTCTCGTATATTTGtatgtggagagagagagaaaaagagacatTATTTCTGTGTAACACGATGTCATATCTTGGTCACATGTGAGACCTGTGCTCACGGTTGTGTACCTGAAATGTTGGATGTAGTTTGCCTTATACACACATGTACCAACACTTGTTTTAACCGGGGACTTGTATGACTTTCGCAGCCCTCCGTCGACAATCATGCATACTTGTGTGCACACACGGACCGTCGAGTACGCATTAGGATCCGGATTCTTTTATGCATGTGTATACAGCTGTGAATTTATGCAAGCTCCCTTTAAACGACGTAACGTGTAAATAATCACCTTTTCTCAaagaatatatgtatttatggaAATAATCTCGCagttttttacttgatttttaaaatttggtAAGAGACCTTTGTATCTGTACAGTTTCGCTGAATAAAATGATTAGATTTTTAA

Function

symbol description
fzd7a Predicted to enable Wnt-activated receptor activity and Wnt-protein binding activity. Acts upstream of or within several processes, including chondrocyte proliferation; epiboly; and gastrulation. Located in plasma membrane. Is expressed in several structures, including margin; mesenchyme; nervous system; neural tube; and pharyngeal arch. Orthologous to human FZD7 (frizzled class receptor 7).

GO:

id name namespace
GO:0060070 canonical Wnt signaling pathway biological_process
GO:0042074 cell migration involved in gastrulation biological_process
GO:0035567 non-canonical Wnt signaling pathway biological_process
GO:0007275 multicellular organism development biological_process
GO:0060027 convergent extension involved in gastrulation biological_process
GO:0035988 chondrocyte proliferation biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0090504 epiboly biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004888 transmembrane signaling receptor activity molecular_function
GO:0042813 Wnt-activated receptor activity molecular_function
GO:0017147 Wnt-protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-990415-223 Predicted to enable Wnt-activated receptor activity and Wnt-protein binding activity. Acts upstream of or within several processes, including chondrocyte proliferation; epiboly; and gastrulation. Located in plasma membrane. Is expressed in several structures, including margin; mesenchyme; nervous system; neural tube; and pharyngeal arch. Orthologous to human FZD7 (frizzled class receptor 7).

Ensembl:

ensembl_id ENSDARG00000060004

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074020 True 2764 mRNA 0.50 1 13352308 13355071

Neighbor

gene id symbol gene type direction distance location
XLOC_037693 CR407547.2 coding downstream 9141 13316919 ~ 13343167 (-)
XLOC_037692 NA coding downstream 105784 13246024 ~ 13246524 (-)
XLOC_037691 NA coding downstream 232051 13097221 ~ 13120257 (-)
XLOC_037690 NA coding downstream 396060 12954567 ~ 12956248 (-)
XLOC_037689 NA coding downstream 403351 12945557 ~ 12948957 (-)
XLOC_037695 NA coding upstream 420325 13775396 ~ 13810187 (-)
XLOC_037696 RAPH1 coding upstream 459892 13814963 ~ 13963078 (-)
XLOC_037697 NA coding upstream 633743 13988814 ~ 14005874 (-)
XLOC_037698 NA coding upstream 672701 14027772 ~ 14037800 (-)
XLOC_037699 fer1l6 coding upstream 689239 14044310 ~ 14084743 (-)
XLOC_037703 NA non-coding upstream 948824 14303895 ~ 14352782 (-)
XLOC_037709 NA non-coding upstream 2162277 15517348 ~ 15530719 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000037_00458429_00460090 FZD7.L, FZD7A, FZD7B, FZD7 coding CI01000037 null 457777 ~ 460719 (-)
bowfin (Amia calva) AMCG00001344 fzd7a,fzd7,LOC107751502,LOC107752890,LOC107668396 coding CM030137.1 CM030137.1 25815838 ~ 25817520 (-)