Gene
RNA
| Item | Value |
|---|---|
| gene id | G1856039 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 32858054 ~ 32861000 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: interferon-induced GTP-binding protein Mx-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2124094 | True | 529 | lncRNA | 0.48 | 2 | 32858054 | 32861000 |
32,855,000
32,856,000
32,857,000
32,858,000
32,859,000
32,860,000
32,861,000
32,862,000
32,863,000
32,864,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502603 | LOC106608383 | coding | upstream | 211881 | 32572446 ~ 32646173 (+) |
| LOC118943948 | NA | coding | upstream | 283161 | 32574841 ~ 32574893 (+) |
| LOC110502602 | LOC106608363 | coding | upstream | 328854 | 32489267 ~ 32530254 (+) |
| mrps5 | LOC106608355 | coding | upstream | 383402 | 32448786 ~ 32474652 (+) |
| LOC110502597 | LOC106608325 | coding | upstream | 882018 | 31969957 ~ 31976036 (+) |
| LOC110502609 | ppa1 | coding | downstream | 122472 | 32983472 ~ 33000172 (+) |
| LOC110502610 | LOC106608453 | coding | downstream | 139430 | 33000430 ~ 33019500 (+) |
| LOC110502611 | trmt2b | coding | downstream | 305314 | 33166314 ~ 33179381 (+) |
| LOC110502614 | LOC106608500 | coding | downstream | 332445 | 33193445 ~ 33205110 (+) |
| wnt8b | LOC106608511 | coding | downstream | 366748 | 33227748 ~ 33236137 (+) |
| G1855969 | NA | non-coding | upstream | 93099 | 32764024 ~ 32764955 (+) |
| G1855902 | NA | non-coding | upstream | 187526 | 32670206 ~ 32670528 (+) |
| G1855876 | NA | non-coding | upstream | 243385 | 32614013 ~ 32614669 (+) |
| G1855747 | NA | non-coding | upstream | 312377 | 32545400 ~ 32545677 (+) |
| G1855746 | NA | non-coding | upstream | 312854 | 32544974 ~ 32545200 (+) |
| G1856042 | NA | non-coding | downstream | 7293 | 32868293 ~ 32873086 (+) |
| G1856069 | NA | non-coding | downstream | 44025 | 32905025 ~ 32908008 (+) |
| G1856094 | LOC106577218 | non-coding | downstream | 80168 | 32937907 ~ 32942047 (+) |
| G1856109 | NA | non-coding | downstream | 96889 | 32957889 ~ 32958247 (+) |
| G1856076 | NA | non-coding | downstream | 108532 | 32969532 ~ 32970892 (+) |
| G1855723 | NA | other | upstream | 338377 | 32518927 ~ 32519677 (+) |
| G1855733 | NA | other | upstream | 348580 | 32508238 ~ 32509474 (+) |
| morn2 | morn2 | other | upstream | 988364 | 31866319 ~ 31869743 (+) |
| LOC110502584 | LOC106608814 | other | upstream | 1233874 | 31620398 ~ 31624184 (+) |
| G1856720 | LOC106577204 | other | downstream | 479019 | 33340019 ~ 33343612 (+) |
| G1856836 | NA | other | downstream | 658482 | 33519482 ~ 33519816 (+) |
| LOC110502624 | LOC106608565 | other | downstream | 693317 | 33554265 ~ 33590741 (+) |
