G1856373


Basic Information

Item Value
gene id G1856373
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 33019516 ~ 33021460 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2124453
tatttgaaagatttctaaaagtatgtgaacccaggcctggtatgtagtacagttgaagtcagaagtttacatacatctaagccaaatacatttaaactcagtttttcacaattcctgacatttaatccaagtaaaaattccctgtcttaggtcaggtaggatcaccactttattttaagaatgtgaaatgtcagaataataggagagagaacgatttacttcagcttttatttatttcatcacattcccagtgggtcagacgtttacacactcaattagtattggtagcattgcctttaaattgtttaacttgggtctaaAATTTCAGGTAGCcctccacaagctttccacaataagttgggtgaattttggcccattcctcctgacagagctggtgtatccgagtcaggtttgtaggcctccgtgcttgcacacgcttttcagttatgcccacaaatgttctttaggttgaggtcaaggctttgtgacggccactccaacaccttgactttgttgtccttaagccataactttggaagtatgcttggggtcattgtccatttggaagacccatttgtgaccaagctttaatttcctgtaagacccatttgtgaccaagctttaaccccCGTgcatcatggttgggatggtgttcttcggcttgcaagcctccccctttttcctccaaacataacaatggtcattatggccaaacagttctatttttgtttcatcagaccaggggacatttctccaaaaagtacgatctttgtccccatgtgcagttgcaaaccgtagccaggcttttttatggcggttttggagcagtggcttcttccttgctgagcggaagTTGATATAGGTGtcgttttacagtggatatagatacttttgtaccggtttccacaggaatcttcacaaggtcctttgctgttgttctgggattgatttgcacttttcgacaccaaagtacatttatctctaggagacagaatgcgtctccttcctgagcggtatgatggctgcatggtcccatggtgtttaaacttgcgtactattgtttgtacagatgagcgtggtaccttcgggcgtttggaaattcctcccaaggatgaaccagacttgtggaggtctacaattctttttctgaggtcttggctgatttattttgattttccaatgatgtcaagcaaagaggcactgagtttgaaggtaggccttgaaatacatccaccggttaacctccaattgactcaaatgatgtcaagtagcctatcagaagcttgtaaagccatcattttctggaattttccaagctgtttaaaggaacagtACTCTTATTGCATGTAAAAtcttgacccactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaattacttgtgtcatgcaaaaaaaagatgtcctaaccgacttgccaaaactatagattgttaacaagacatttgtggagtggttgaagaacgagttttgatgactccaacctaagtgtatgtaaacttccaacttcaaatgtttgtggaaggagagagcagcAATGTCGAAAAGACACAAACACGGAACTGTTACACCAATAACCCCTCTGAAATCCAATGCCAGCAACTTAAAAATAAACCATGGTTACAAACTGGTTCAAAGCGATGACATGTCCTACCCTGTAACGTCATCATAAGTGGGAGGAGAaataatactgtaataataaAACTGTTTGACTGACAGGTATGATGAGGTATGATTCAAAATGCCCACCACCACAGTACTTTCAGAAAGTAACAGATCATTATTGAAAATGACGTGTAATGACGTGTAAACTACGCAATATTGGTTTTGAAGTTTGAATTCACTACATAGGGCTCAGACTATAAAAGGGTGTACCAATTATTAATAGATTTTACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2124453 True 1945 lncRNA 0.40 1 33019516 33021460

Neighbor

gene id symbol gene type direction distance location
LOC110502608 eif4ebp2 coding downstream 43641 32969517 ~ 32975875 (-)
LOC110502606 LOC102780737 coding downstream 75228 32937921 ~ 32944288 (-)
LOC110502604 LOC106608394 coding downstream 161323 32653335 ~ 32858193 (-)
LOC110502600 LOC106608331 coding downstream 780218 32036219 ~ 32239298 (-)
LOC110502599 NA coding downstream 1034948 31982805 ~ 31984568 (-)
LOC110503103 LOC106608472 coding upstream 17210 33038670 ~ 33141219 (-)
dnajb12a LOC106608494 coding upstream 132413 33153873 ~ 33166327 (-)
LOC110502617 LOC106608514 coding upstream 265381 33286841 ~ 33330278 (-)
hhat hhat coding upstream 420498 33441958 ~ 33550430 (-)
LOC110502621 LOC106608559 coding upstream 568997 33590457 ~ 33601995 (-)
G1856370 NA non-coding downstream 2538 33016695 ~ 33016978 (-)
G1856330 NA non-coding downstream 73151 32946080 ~ 32946365 (-)
G1856326 NA non-coding downstream 93064 32926199 ~ 32926452 (-)
G1856142 NA non-coding downstream 427713 32586244 ~ 32591803 (-)
G1856383 NA non-coding upstream 9765 33031225 ~ 33031426 (-)
G1856551 NA non-coding upstream 22313 33043773 ~ 33044740 (-)
G1856699 NA non-coding upstream 292529 33313989 ~ 33314395 (-)
G1856710 NA non-coding upstream 311768 33333228 ~ 33333526 (-)
G1856715 LOC106612151 non-coding upstream 314859 33336319 ~ 33336598 (-)
G1856217 NA other downstream 373376 32637425 ~ 32646140 (-)
G1855822 LOC106608363 other downstream 503235 32515749 ~ 32516281 (-)
G1855821 NA other downstream 504108 32515066 ~ 32515408 (-)
G1855326 NA other downstream 1038183 31979997 ~ 31981333 (-)
G1854905 NA other downstream 1801345 31217597 ~ 31218171 (-)
kcnma1a LOC106613356 other upstream 1155597 34177056 ~ 34469529 (-)
G1858519 NA other upstream 1799316 34820776 ~ 34821565 (-)
G1858575 LOC106613168 other upstream 1818440 34839900 ~ 34841662 (-)
G1858636 NA other upstream 1915229 34936689 ~ 34968861 (-)

Expression


Co-expression Network