G1857084


Basic Information

Item Value
gene id G1857084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 33554251 ~ 33556347 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2125227
gggaaatatgggaccaacactttacatgttgtgtatatatttttattctgtgTATATATTactttatacagtatatatatattttatttttcttaaCAAAATTATATTACTCCTTATGGGGGTCAGTGGCCTGCCATACTCCCTCTGTCCCCATGcaaccccttccctctctcccatcctcttggGTAGGATAGCACAACCCTTcgatgtctctctccctccctttgttCTGGGGTAAGATAGCACACTtcttccctcactctttctctttttcattatctttctctccttccttctttctctctctgtagacaGGATATTACGGCCACAGGGCCTCCCTTTACCTCAGCATGGTTGCCAGCCGACAGGGTCTTGTTACAGCGTTCGCATTTCAGGCAGAACCGGTGCCAGTTTTTCCCCAGCGAGCTCACCTTCTCAgcAAAAACACATCATTTGTGCATCTGGGGCACCTCGACGTCATTCTTCAGCAATTCTTTGTCCAGCTGACGATCAACCCGAACTTCAAATTACCTTCAAATTCTATCTGCGGCGCTGGCAGAACGATGTAGTGCCGATCGCGCATTCAACTGTGACGTCGG

Function

NR:

description
cysteine-rich protein 2-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2125227 True 599 lncRNA 0.46 2 33554251 33556347

Neighbor

gene id symbol gene type direction distance location
hhat hhat coding downstream 3821 33441958 ~ 33550430 (-)
LOC110502617 LOC106608514 coding downstream 223973 33286841 ~ 33330278 (-)
dnajb12a LOC106608494 coding downstream 387924 33153873 ~ 33166327 (-)
LOC110503103 LOC106608472 coding downstream 413032 33038670 ~ 33141219 (-)
LOC110502608 eif4ebp2 coding downstream 578376 32969517 ~ 32975875 (-)
LOC110502621 LOC106608559 coding upstream 34110 33590457 ~ 33601995 (-)
LOC110502623 LOC106608550 coding upstream 46171 33602518 ~ 33617557 (-)
LOC110502626 LOC106608577 coding upstream 101141 33657488 ~ 33663402 (-)
ifit8 LOC106608578 coding upstream 107741 33664088 ~ 33671763 (-)
LOC118943903 NA coding upstream 128323 33684670 ~ 33687696 (-)
G1857003 NA non-coding downstream 2324 33551702 ~ 33551927 (-)
G1857000 NA non-coding downstream 9269 33544766 ~ 33544982 (-)
G1856988 NA non-coding downstream 22860 33531071 ~ 33531391 (-)
G1856980 NA non-coding downstream 30264 33523764 ~ 33523987 (-)
G1856979 NA non-coding downstream 30779 33523171 ~ 33523472 (-)
G1857117 NA non-coding upstream 65144 33621491 ~ 33622187 (-)
G1857134 LOC106608573 non-coding upstream 87625 33643972 ~ 33650815 (-)
G1857290 NA non-coding upstream 213588 33769935 ~ 33770199 (-)
G1857295 NA non-coding upstream 220981 33777328 ~ 33777586 (-)
G1857302 NA non-coding upstream 234479 33790826 ~ 33791122 (-)
G1856217 NA other downstream 908111 32637425 ~ 32646140 (-)
G1855822 LOC106608363 other downstream 1037970 32515749 ~ 32516281 (-)
G1855821 NA other downstream 1038843 32515066 ~ 32515408 (-)
G1855326 NA other downstream 1572918 31979997 ~ 31981333 (-)
G1854905 NA other downstream 2336080 31217597 ~ 31218171 (-)
kcnma1a LOC106613356 other upstream 620710 34177056 ~ 34469529 (-)
G1858519 NA other upstream 1264429 34820776 ~ 34821565 (-)
G1858575 LOC106613168 other upstream 1283553 34839900 ~ 34841662 (-)
G1858636 NA other upstream 1380342 34936689 ~ 34968861 (-)

Expression


Co-expression Network