G1857134 (LOC106608573)


Basic Information

Item Value
gene id G1857134
gene name LOC106608573
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 33643972 ~ 33650815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2125287
GTGCAGCTGGAAGTCCCCGGTCTTGTATCCCACAGCGAAGTTGTTCTGGGTCATCTTAGACTTGGCCGTGTCAAAAGTCATCTGGTAGCCGGCGAGCCAGCCCTCGTAACCCACGACGGCCGCCCCGTGGATAGTGGGGCCAGCAAAGTCAAAGTCGACATCACAGCCCAGGTTGACAAACTCGCGCTTGTAGGCGGTCTTGCCAGTGTTTGGTGAGAAGGTTGTGTCGAATGTCAGCTTCAGACCCTTGGCAATCTGGTCTTCAACGGTGATCTCTGTTCCCAGGGTGTTGTCAGTGTTCCACTTCTCTGTGAAGGTCAGGCCATACTCGGACCGCTTGTATTTGGTttcaaggctacctgccaccttgCTGGTGTCCGTGTTTGAGGAGCCAGCTGTTTTGAACTCACTCCGCTGTCAGACTTGGTCTTCACATCAAGCTTCACCAGGCCAAACCCATAGCCTTTGTTGAAGATATCCTTGGCAGATTTGCCAAGGTCACCATATGATGGAGGCACTGCCATTACCGGTAAAATATGGGACTATAGGTCAACTAAAGTGACTTTATTCAGATGTTTGTGGCGCCGCTGTAGACTTCGCCGGTTGGACTGGAGTGTAGGACGAATTGAAGGAGACTGCAAGGAATGACGTCCACAGCATATCAAACATCCGAAGCGAAGGACCCCTCCTTGAAACATGTTCACCTGTTAACATACTTGCAGATTCATGACAAAATAATTACAAAATGAAAAAAGgtaaaaatgcattttttttagcTGTAaatattttgaatatttttttaaacattttcttTATTATAG

Function

NR:

description
PREDICTED: voltage-dependent anion-selective channel protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2125287 True 821 lncRNA 0.47 6 33643972 33650815

Neighbor

gene id symbol gene type direction distance location
LOC110502623 LOC106608550 coding downstream 26415 33602518 ~ 33617557 (-)
LOC110502621 LOC106608559 coding downstream 41977 33590457 ~ 33601995 (-)
hhat hhat coding downstream 93542 33441958 ~ 33550430 (-)
LOC110502617 LOC106608514 coding downstream 313694 33286841 ~ 33330278 (-)
dnajb12a LOC106608494 coding downstream 477645 33153873 ~ 33166327 (-)
LOC110502626 LOC106608577 coding upstream 6673 33657488 ~ 33663402 (-)
ifit8 LOC106608578 coding upstream 13273 33664088 ~ 33671763 (-)
LOC118943903 NA coding upstream 33855 33684670 ~ 33687696 (-)
znf503 LOC106608619 coding upstream 182252 33833067 ~ 33836044 (-)
kcnma1a LOC106613356 coding upstream 526241 34177056 ~ 34469529 (-)
G1857117 NA non-coding downstream 21785 33621491 ~ 33622187 (-)
G1857084 NA non-coding downstream 87625 33554251 ~ 33556347 (-)
G1857003 NA non-coding downstream 92045 33551702 ~ 33551927 (-)
G1857000 NA non-coding downstream 98990 33544766 ~ 33544982 (-)
G1856988 NA non-coding downstream 112581 33531071 ~ 33531391 (-)
G1857290 NA non-coding upstream 119120 33769935 ~ 33770199 (-)
G1857295 NA non-coding upstream 126513 33777328 ~ 33777586 (-)
G1857302 NA non-coding upstream 140011 33790826 ~ 33791122 (-)
G1857310 NA non-coding upstream 153922 33804737 ~ 33804971 (-)
G1857281 NA non-coding upstream 186947 33837762 ~ 33838320 (-)
G1856217 NA other downstream 997832 32637425 ~ 32646140 (-)
G1855822 LOC106608363 other downstream 1127691 32515749 ~ 32516281 (-)
G1855821 NA other downstream 1128564 32515066 ~ 32515408 (-)
G1855326 NA other downstream 1662639 31979997 ~ 31981333 (-)
G1858519 NA other upstream 1169961 34820776 ~ 34821565 (-)
G1858575 LOC106613168 other upstream 1189085 34839900 ~ 34841662 (-)
G1858636 NA other upstream 1285874 34936689 ~ 34968861 (-)
G1859038 NA other upstream 1592299 35243114 ~ 35243589 (-)

Expression


Co-expression Network