Gene
RNA
| Item | Value |
|---|---|
| gene id | G1857302 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 33790826 ~ 33791122 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2125466 | True | 297 | lncRNA | 0.43 | 1 | 33790826 | 33791122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943903 | NA | coding | downstream | 103130 | 33684670 ~ 33687696 (-) |
| ifit8 | LOC106608578 | coding | downstream | 119063 | 33664088 ~ 33671763 (-) |
| LOC110502626 | LOC106608577 | coding | downstream | 127424 | 33657488 ~ 33663402 (-) |
| LOC110502623 | LOC106608550 | coding | downstream | 173269 | 33602518 ~ 33617557 (-) |
| LOC110502621 | LOC106608559 | coding | downstream | 188831 | 33590457 ~ 33601995 (-) |
| znf503 | LOC106608619 | coding | upstream | 41945 | 33833067 ~ 33836044 (-) |
| kcnma1a | LOC106613356 | coding | upstream | 385934 | 34177056 ~ 34469529 (-) |
| dlg5a | LOC106613304 | coding | upstream | 683239 | 34474361 ~ 34535648 (-) |
| LOC118943866 | NA | coding | upstream | 707685 | 34498807 ~ 34501154 (-) |
| anxa11a | LOC106613295 | coding | upstream | 757514 | 34548636 ~ 34573061 (-) |
| G1857295 | NA | non-coding | downstream | 13240 | 33777328 ~ 33777586 (-) |
| G1857290 | NA | non-coding | downstream | 20627 | 33769935 ~ 33770199 (-) |
| G1857134 | LOC106608573 | non-coding | downstream | 140011 | 33643972 ~ 33650815 (-) |
| G1857117 | NA | non-coding | downstream | 168639 | 33621491 ~ 33622187 (-) |
| G1857084 | NA | non-coding | downstream | 234479 | 33554251 ~ 33556347 (-) |
| G1857310 | NA | non-coding | upstream | 13615 | 33804737 ~ 33804971 (-) |
| G1857281 | NA | non-coding | upstream | 46640 | 33837762 ~ 33838320 (-) |
| G1858123 | NA | non-coding | upstream | 239794 | 34030916 ~ 34046517 (-) |
| G1858125 | NA | non-coding | upstream | 253653 | 34044775 ~ 34050331 (-) |
| G1858185 | NA | non-coding | upstream | 347936 | 34139058 ~ 34286206 (-) |
| G1856217 | NA | other | downstream | 1144686 | 32637425 ~ 32646140 (-) |
| G1855822 | LOC106608363 | other | downstream | 1274545 | 32515749 ~ 32516281 (-) |
| G1855821 | NA | other | downstream | 1275418 | 32515066 ~ 32515408 (-) |
| G1855326 | NA | other | downstream | 1809493 | 31979997 ~ 31981333 (-) |
| G1858519 | NA | other | upstream | 1029654 | 34820776 ~ 34821565 (-) |
| G1858575 | LOC106613168 | other | upstream | 1048778 | 34839900 ~ 34841662 (-) |
| G1858636 | NA | other | upstream | 1145567 | 34936689 ~ 34968861 (-) |
| G1859038 | NA | other | upstream | 1451992 | 35243114 ~ 35243589 (-) |
