G1858244


Basic Information

Item Value
gene id G1858244
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 34267374 ~ 34268188 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2126534
TACTCTGTAGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGAGCCACAGTTACTCTGTAGGGTAAGAATAATGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGAGCCACAGTTACTCTGTAGGGTAAGAATAATGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAACATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTAGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCGAGTGCCATAGTTACTCTGTGGGGTAAAAATAAAGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGTGCCACAGTTACTCTGTAGGGTAAGAATAATGATCTAGTGCCATAGTTACTCTGTGGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTAGGGTAAGAATAAAGATCTAGTGCCATAGTTACTCTGTAGGGTAAGA

Function

NR:

description
uncharacterized protein LOC110519242

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2126534 True 701 lncRNA 0.39 2 34267374 34268188

Neighbor

gene id symbol gene type direction distance location
znf503 LOC106608619 coding downstream 431330 33833067 ~ 33836044 (-)
LOC118943903 NA coding downstream 579678 33684670 ~ 33687696 (-)
ifit8 LOC106608578 coding downstream 595611 33664088 ~ 33671763 (-)
LOC110502626 LOC106608577 coding downstream 603972 33657488 ~ 33663402 (-)
LOC110502623 LOC106608550 coding downstream 649817 33602518 ~ 33617557 (-)
dlg5a LOC106613304 coding upstream 206173 34474361 ~ 34535648 (-)
LOC118943866 NA coding upstream 230619 34498807 ~ 34501154 (-)
anxa11a LOC106613295 coding upstream 280448 34548636 ~ 34573061 (-)
LOC110502637 LOC106613187 coding upstream 526153 34794341 ~ 34810118 (-)
slc25a16 slc25a16 coding upstream 554832 34823020 ~ 34837641 (-)
kcnma1a LOC106613356 non-coding downstream 9636 34177056 ~ 34469529 (-)
G1858125 NA non-coding downstream 217043 34044775 ~ 34050331 (-)
G1858123 NA non-coding downstream 220857 34030916 ~ 34046517 (-)
G1857281 NA non-coding downstream 429054 33837762 ~ 33838320 (-)
G1857310 NA non-coding downstream 462403 33804737 ~ 33804971 (-)
G1858455 NA non-coding upstream 380600 34648788 ~ 34649348 (-)
G1858456 NA non-coding upstream 381471 34649659 ~ 34650113 (-)
G1858569 NA non-coding upstream 543128 34811316 ~ 34811591 (-)
G1858520 NA non-coding upstream 546624 34814812 ~ 34815387 (-)
G1858577 NA non-coding upstream 575757 34843945 ~ 34844171 (-)
LOC110502621 LOC106608559 other downstream 665533 33590457 ~ 33601995 (-)
G1856217 NA other downstream 1621234 32637425 ~ 32646140 (-)
G1855822 LOC106608363 other downstream 1751093 32515749 ~ 32516281 (-)
G1855821 NA other downstream 1751966 32515066 ~ 32515408 (-)
G1858519 NA other upstream 552588 34820776 ~ 34821565 (-)
G1858575 LOC106613168 other upstream 571712 34839900 ~ 34841662 (-)
G1858636 NA other upstream 668501 34936689 ~ 34968861 (-)
G1859038 NA other upstream 974926 35243114 ~ 35243589 (-)
LOC110502661 golga7b other upstream 1686032 35954220 ~ 36014458 (-)

Expression


Co-expression Network