Gene
RNA
| Item | Value |
|---|---|
| gene id | G1857802 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 34580414 ~ 34580767 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2126001 | True | 354 | lncRNA | 0.39 | 1 | 34580414 | 34580767 |
34,578,000
34,578,400
34,578,800
34,579,200
34,579,600
34,580,000
34,580,400
34,580,400
34,580,800
34,581,200
34,581,600
34,582,000
34,582,400
34,582,800
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502629 | cssa18h10orf11 | coding | upstream | 428128 | 33856625 ~ 34152286 (+) |
| vdac2 | LOC106608573 | coding | upstream | 924692 | 33644096 ~ 33655722 (+) |
| LOC110502624 | LOC106608565 | coding | upstream | 989673 | 33554265 ~ 33590741 (+) |
| LOC110502619 | LOC106608528 | coding | upstream | 1147791 | 33342904 ~ 33432623 (+) |
| mrpl57 | LOC106577204 | coding | upstream | 1237915 | 33339994 ~ 33342499 (+) |
| washc2c | NA | coding | downstream | 4162 | 34584929 ~ 34618960 (+) |
| zfand4 | LOC106613273 | coding | downstream | 38610 | 34619377 ~ 34648281 (+) |
| LOC110502638 | LOC106613192 | coding | downstream | 78432 | 34659199 ~ 34792621 (+) |
| LOC110502640 | NA | coding | downstream | 196764 | 34777531 ~ 34779294 (+) |
| LOC110502641 | LOC106613168 | coding | downstream | 257210 | 34837977 ~ 34885748 (+) |
| G1857704 | NA | non-coding | upstream | 94582 | 34431681 ~ 34485832 (+) |
| G1857702 | NA | non-coding | upstream | 148979 | 34430772 ~ 34431435 (+) |
| G1857474 | NA | non-coding | upstream | 529907 | 34049107 ~ 34050507 (+) |
| G1857469 | NA | non-coding | upstream | 545190 | 34032450 ~ 34035224 (+) |
| G1857467 | NA | non-coding | upstream | 549582 | 34025408 ~ 34030832 (+) |
| G1857826 | NA | non-coding | downstream | 72638 | 34653405 ~ 34670649 (+) |
| G1857922 | NA | non-coding | downstream | 234343 | 34815110 ~ 34815446 (+) |
| G1857925 | NA | non-coding | downstream | 239162 | 34819929 ~ 34820239 (+) |
| G1857926 | NA | non-coding | downstream | 242873 | 34823640 ~ 34826297 (+) |
| G1857224 | NA | other | upstream | 803673 | 33776305 ~ 33776741 (+) |
| G1856836 | NA | other | upstream | 1060598 | 33519482 ~ 33519816 (+) |
| G1856720 | LOC106577204 | other | upstream | 1236802 | 33340019 ~ 33343612 (+) |
| wnt8b | LOC106608511 | other | upstream | 1349035 | 33227748 ~ 33236137 (+) |
| G1857923 | NA | other | downstream | 236982 | 34817749 ~ 34818136 (+) |
| G1859175 | NA | other | downstream | 835745 | 35416512 ~ 35417101 (+) |
| crtac1b | crtac1 | other | downstream | 1349292 | 35879332 ~ 35934997 (+) |
| G1859436 | NA | other | downstream | 1373401 | 35954168 ~ 36026986 (+) |
| LOC110503110 | LOC106612973 | other | downstream | 1683731 | 36264498 ~ 36391057 (+) |
