G1858600


Basic Information

Item Value
gene id G1858600
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 34875618 ~ 34876183 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2126908
ccatctcctcattggttatacccacgtgggtgattgaaagacgaaatgttttgccggttgtcgtggtaaaagtgtagatgccaatcaccatataagttcaaagatggaaaagcctggaaggaggagagatgactagaaacgattcggttggtcgttttatgtgtggattaattgtcggagtagaagaccttgtgcatttcaggtaaaataacaactcaatgtttatatcccaggacaaattagctagcaacagcaagctagctaaataggacaaattagctaacaagtgcaagctaactagctaaattgccatacatgtttaatgcttttcgacctgcaccaggctggccaaaacatcactgctctagaggagatctgcatggaggaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacattttacctctgtcattgccaacaaagggtatataacaaagtattgagataaacttttgttattgaccaaatacttattttccaccataatttgcaaataaattcattaaaaatcctacaatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2126908 True 566 lncRNA 0.39 1 34875618 34876183

Neighbor

gene id symbol gene type direction distance location
slc25a16 slc25a16 coding downstream 37977 34823020 ~ 34837641 (-)
LOC110502637 LOC106613187 coding downstream 65500 34794341 ~ 34810118 (-)
anxa11a LOC106613295 coding downstream 302557 34548636 ~ 34573061 (-)
dlg5a LOC106613304 coding downstream 339970 34474361 ~ 34535648 (-)
LOC110502644 LOC106613146 coding upstream 39319 34915502 ~ 34936389 (-)
LOC110502648 LOC106613093 coding upstream 176713 35052896 ~ 35059019 (-)
LOC110503106 NA coding upstream 189163 35065346 ~ 35066105 (-)
LOC110502651 LOC106613069 coding upstream 320010 35196193 ~ 35222086 (-)
LOC110502652 LOC106577244 coding upstream 450507 35326690 ~ 35342828 (-)
G1858599 LOC106613168 non-coding downstream 2483 34872706 ~ 34873135 (-)
G1858595 NA non-coding downstream 7834 34867563 ~ 34867784 (-)
G1858592 NA non-coding downstream 13201 34861660 ~ 34862417 (-)
G1858588 NA non-coding downstream 16478 34858913 ~ 34859140 (-)
G1858587 NA non-coding downstream 17236 34858175 ~ 34858382 (-)
G1858601 NA non-coding upstream 1436 34877619 ~ 34878058 (-)
G1858602 LOC106613168 non-coding upstream 2496 34878679 ~ 34879051 (-)
G1858603 LOC106577253 non-coding upstream 3529 34879712 ~ 34880102 (-)
G1858604 NA non-coding upstream 4136 34880319 ~ 34880621 (-)
G1858516 if4e non-coding upstream 30374 34906557 ~ 34909136 (-)
G1858575 LOC106613168 other downstream 33956 34839900 ~ 34841662 (-)
G1858519 NA other downstream 54053 34820776 ~ 34821565 (-)
kcnma1a LOC106613356 other downstream 687748 34177056 ~ 34469529 (-)
LOC110502621 LOC106608559 other downstream 1273777 33590457 ~ 33601995 (-)
G1856217 NA other downstream 2229478 32637425 ~ 32646140 (-)
G1858636 NA other upstream 60506 34936689 ~ 34968861 (-)
G1859038 NA other upstream 366931 35243114 ~ 35243589 (-)
LOC110502661 golga7b other upstream 1078037 35954220 ~ 36014458 (-)
G1860462 NA other upstream 1572648 36448831 ~ 36451459 (-)
G1861368 NA other upstream 2458844 37335027 ~ 37335414 (-)

Expression


Co-expression Network