Gene
RNA
| Item | Value |
|---|---|
| gene id | G1858601 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 34877619 ~ 34878058 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: methylcytosine dioxygenase TET1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2126909 | True | 440 | lncRNA | 0.52 | 1 | 34877619 | 34878058 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc25a16 | slc25a16 | coding | downstream | 39978 | 34823020 ~ 34837641 (-) |
| LOC110502637 | LOC106613187 | coding | downstream | 67501 | 34794341 ~ 34810118 (-) |
| anxa11a | LOC106613295 | coding | downstream | 304558 | 34548636 ~ 34573061 (-) |
| dlg5a | LOC106613304 | coding | downstream | 341971 | 34474361 ~ 34535648 (-) |
| LOC110502644 | LOC106613146 | coding | upstream | 37444 | 34915502 ~ 34936389 (-) |
| LOC110502648 | LOC106613093 | coding | upstream | 174838 | 35052896 ~ 35059019 (-) |
| LOC110503106 | NA | coding | upstream | 187288 | 35065346 ~ 35066105 (-) |
| LOC110502651 | LOC106613069 | coding | upstream | 318135 | 35196193 ~ 35222086 (-) |
| LOC110502652 | LOC106577244 | coding | upstream | 448632 | 35326690 ~ 35342828 (-) |
| G1858600 | NA | non-coding | downstream | 1436 | 34875618 ~ 34876183 (-) |
| G1858599 | LOC106613168 | non-coding | downstream | 4484 | 34872706 ~ 34873135 (-) |
| G1858595 | NA | non-coding | downstream | 9835 | 34867563 ~ 34867784 (-) |
| G1858592 | NA | non-coding | downstream | 15202 | 34861660 ~ 34862417 (-) |
| G1858588 | NA | non-coding | downstream | 18479 | 34858913 ~ 34859140 (-) |
| G1858602 | LOC106613168 | non-coding | upstream | 621 | 34878679 ~ 34879051 (-) |
| G1858603 | LOC106577253 | non-coding | upstream | 1654 | 34879712 ~ 34880102 (-) |
| G1858604 | NA | non-coding | upstream | 2261 | 34880319 ~ 34880621 (-) |
| G1858516 | if4e | non-coding | upstream | 28499 | 34906557 ~ 34909136 (-) |
| G1858620 | NA | non-coding | upstream | 31392 | 34909450 ~ 34909649 (-) |
| G1858575 | LOC106613168 | other | downstream | 35957 | 34839900 ~ 34841662 (-) |
| G1858519 | NA | other | downstream | 56054 | 34820776 ~ 34821565 (-) |
| kcnma1a | LOC106613356 | other | downstream | 689749 | 34177056 ~ 34469529 (-) |
| LOC110502621 | LOC106608559 | other | downstream | 1275778 | 33590457 ~ 33601995 (-) |
| G1856217 | NA | other | downstream | 2231479 | 32637425 ~ 32646140 (-) |
| G1858636 | NA | other | upstream | 58631 | 34936689 ~ 34968861 (-) |
| G1859038 | NA | other | upstream | 365056 | 35243114 ~ 35243589 (-) |
| LOC110502661 | golga7b | other | upstream | 1076162 | 35954220 ~ 36014458 (-) |
| G1860462 | NA | other | upstream | 1570773 | 36448831 ~ 36451459 (-) |
| G1861368 | NA | other | upstream | 2456969 | 37335027 ~ 37335414 (-) |
