G1858728


Basic Information

Item Value
gene id G1858728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 35001039 ~ 35004369 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2127044
acagcgcgtcggctttGGTGTTTTGGGAGCCTGGCCGGTATGAGAGGGTAAACCGGAACCtggtaaaaaacatggcccatctagcctgacgtggatttagtctcttcgctgcccggatatactcgagattacgatggtcagtccagatgagaaaagggtgtttagccccctcaagccaatgtctccacaccttcagagccttgactacagctaacaactcccggtcccccacatcatagtttcgctccgctgggctgagcttgctcgaaaagaaagcacacGGGCGAAGCTTGGGTGGCACGCCCGAGCGTTGGGACAGCACGGCTccgaccccagcctcggacgcatccacctccactatgacgaccgcagagctccgcccgaacaggcaggagagccaacttcagcggaagtcgtgacaggcaGCCTTCATGTTCCTGTTCAAAACTAATAGAAAAGCTTATTTTATTCAAAGATTCTTCTGGCTTTAATGGCGCCAAGAAGATCTACAACTATCACCATTCAATAGCCAGAAGAATTTCAGAGAACTGCTTTGGGGATCCTTGCTGCAAGATGGAGGATCCTGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2127044 True 588 lncRNA 0.53 2 35001039 35004369

Neighbor

gene id symbol gene type direction distance location
LOC110502644 LOC106613146 coding downstream 64650 34915502 ~ 34936389 (-)
slc25a16 slc25a16 coding downstream 163398 34823020 ~ 34837641 (-)
LOC110502637 LOC106613187 coding downstream 190921 34794341 ~ 34810118 (-)
anxa11a LOC106613295 coding downstream 427978 34548636 ~ 34573061 (-)
LOC118943866 NA coding downstream 499885 34498807 ~ 34501154 (-)
LOC110502648 LOC106613093 coding upstream 48527 35052896 ~ 35059019 (-)
LOC110503106 NA coding upstream 60977 35065346 ~ 35066105 (-)
LOC110502651 LOC106613069 coding upstream 191824 35196193 ~ 35222086 (-)
LOC110502652 LOC106577244 coding upstream 322321 35326690 ~ 35342828 (-)
LOC110502653 LOC106613059 coding upstream 396464 35400833 ~ 35500950 (-)
G1858717 NA non-coding downstream 16065 34984519 ~ 34984974 (-)
G1858656 NA non-coding downstream 21256 34978210 ~ 34979783 (-)
G1858630 NA non-coding downstream 71525 34929171 ~ 34929514 (-)
G1858620 NA non-coding downstream 91390 34909450 ~ 34909649 (-)
G1858516 if4e non-coding downstream 91903 34906557 ~ 34909136 (-)
G1858966 NA non-coding upstream 119665 35124034 ~ 35124485 (-)
G1858978 NA non-coding upstream 134740 35139109 ~ 35139376 (-)
G1858984 NA non-coding upstream 146013 35150382 ~ 35150615 (-)
G1858985 NA non-coding upstream 146390 35150759 ~ 35150982 (-)
G1858989 NA non-coding upstream 152423 35156792 ~ 35157022 (-)
G1858636 NA other downstream 32178 34936689 ~ 34968861 (-)
G1858575 LOC106613168 other downstream 159377 34839900 ~ 34841662 (-)
G1858519 NA other downstream 179474 34820776 ~ 34821565 (-)
kcnma1a LOC106613356 other downstream 813169 34177056 ~ 34469529 (-)
LOC110502621 LOC106608559 other downstream 1399198 33590457 ~ 33601995 (-)
G1859038 NA other upstream 238745 35243114 ~ 35243589 (-)
LOC110502661 golga7b other upstream 949851 35954220 ~ 36014458 (-)
G1860462 NA other upstream 1444462 36448831 ~ 36451459 (-)
G1861368 NA other upstream 2330658 37335027 ~ 37335414 (-)
G1862272 NA other upstream 3152380 38156749 ~ 38157209 (-)

Expression


Co-expression Network