G1860010


Basic Information

Item Value
gene id G1860010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 35733353 ~ 35735345 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2128405
ggtCTCGAAATGGACTACTTTACTAAAACCACACCAAATTAAAAAAAAGTGGGCACCACACAGAAATTAACAATTAAGTATTTCTATCAAAATTATTAAACATGCATTGGCCCAAATGAGTGAAAACTGTGTACTTGGtcatgaaacaaacaaaaaaaatacacatcTGCGAGTCGTTTAAAAGGTAATAGTCTCGTGGTTTCTCATGTGACTTTTTCCCCAATATGAAGTTTTGTTTGCTTTGACCAATCTCTACGAGGCTGGAAACAAGGCAACCACAGAAAAGCAGAACCTCCTCTTCTGTAtaataatgtaaataaggtatcggtttaaaaaaaaaaataattgaaaaacttgttttcactttgtcattattgtgtgtagattgagggaaaagaaacaatcaattttagaataaggctgtaacgtaacaaaatattgaaaaagtcaaggggtctgaataccctCCGAATACAGTGTAAATTCAGTGATTCTGTCCCTTCATAGGACGAAGAGGGTGCTTGTTCTAGAGAATAGATGGTAGATGGAAACCGCAAGAAAAATATATTTGGTTCATTCAAGAAACAAGAGGCTTATTTCCCAAGATGTTTTAAAACCTAGCTTACTAAATAACTACAATTACTCAAACCTTGACAAACACAGAAAAGTAGGTGTCAATCAATTCTCAGTGTCAAAAATCACCCAACAGATTCAGTGTGCATTTAAGTGGTTGACCATCGGGTACAGTAGTAAAATGaaaacacacattaatacactGAAGAACAAGTTACCTTTATGGAATTTGGTGGTACTGCTCACTTCCCCAACCTCTCTTTAGATCTTCATTATGGGGTTTGTGCACATTGCAATGGACCACATAGCTAAGGCCAATAGCACAGATCCATAGCCCAGGGTAGATCAAGcattgggtcatgttcattagggcatgccAAGGAAAATGTTTGGAAGAAATCCAGGTAGTCCTTCCCTGTGTCTGTTTTCTcacatttggtgcctaatgaacattaTACTATTATAAGGTTACTAAGCACCAAGTCAGAGTGGAAGGGAGGCACCATCCTTTTAGGGAGGAACTGAAACATCAGGGTGAATCTGCTGCATGGCTTCTGGGTCTCCTTTGGTGTGGAGGGCCTATTCCATTCTGACGGTATTGGCACGGTAAGACAGATGTGGTTGGGAAATGAGAGAAGGAGGACAAGGACAGCACAGGCCACAAAACCCAGACAGTAGTGGCTGTAGattagcatagcatagcatagccaGGGCTGAAGGGACCGAGACTGCAGCTTGCCCTTACTAGAGAAACAGCACCCATTTTCACTTTCCCAGGATCAAGACTCAAATCAGATAAATGATCCTCCTAGAGAATCTTGACAATGTATGACACCTTTCTTCCTCTAAGCCTTGAACTAGACTCATTTAGAGAGGCCATGGCTGGTTAGGCTAACGAATGCTAACTGTAAAGGCTGATAAGGTTTTAAGGCTTAAAGCTTTTGAGGTTGGTTCCCATGATGAGCCTAAACACCGAGCTGTGGTCAAGGGGAACGGCTGTTAATTGGTCCATTATTAGTCAAAATACGCTCTTATTAATGATGGTGTCCACTCATTAATTATGGTGTCCACCATTTTATTAGTCTTAACATTGTCCTCCATAACAACAGTTCTCCTGCTGTCCTAGAGGGGAGAACATGGCCCAATTTAATAGTCCTTCGGCTCAGTCAGTGTTCGTAATGATCCAGTTTCTATAAAAGCCCAGATGTGGGGAGGAAACTGTGCTCAGGGCTGCCAGGGCTTCCTGTCTTTGCCCCTCTGTTCGGAAATGTGTTTGTAGCGACACTTGTCCCCAAAATGGCAGCCAGTGGTCCTCCAGAAGTAACACTCATCTCCGT

Function

NR:

description
hsp70-Hsp90 organizing protein 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2128405 True 1910 lncRNA 0.41 3 35733353 35735345

Neighbor

gene id symbol gene type direction distance location
LOC110503108 LOC106613040 coding downstream 132732 35545574 ~ 35600621 (-)
LOC110502653 LOC106613059 coding downstream 232403 35400833 ~ 35500950 (-)
LOC110502652 LOC106577244 coding downstream 390525 35326690 ~ 35342828 (-)
LOC110502651 LOC106613069 coding downstream 511267 35196193 ~ 35222086 (-)
LOC110503106 NA coding downstream 667248 35065346 ~ 35066105 (-)
LOC110502661 golga7b coding upstream 228749 35954220 ~ 36014458 (-)
marveld1 marveld1 coding upstream 893163 36628508 ~ 36629750 (-)
LOC110502666 LOC106612942 coding upstream 918806 36654151 ~ 36666245 (-)
LOC110502671 LOC106613549 coding upstream 1057327 36792672 ~ 36794544 (-)
LOC110502672 nkx2-3 coding upstream 1068042 36803387 ~ 36807411 (-)
G1859964 NA non-coding downstream 68520 35661259 ~ 35664833 (-)
G1859957 pyroxd2 non-coding downstream 77640 35655334 ~ 35655713 (-)
G1859887 NA non-coding downstream 107102 35549638 ~ 35626251 (-)
G1859834 NA non-coding downstream 180522 35550757 ~ 35552831 (-)
G1860109 NA non-coding upstream 138781 35874126 ~ 35877813 (-)
G1860206 NA non-coding upstream 314947 36050292 ~ 36050569 (-)
G1860210 NA non-coding upstream 325036 36060381 ~ 36060599 (-)
G1860216 NA non-coding upstream 334737 36070082 ~ 36070300 (-)
G1859038 NA other downstream 489764 35243114 ~ 35243589 (-)
G1858636 NA other downstream 764492 34936689 ~ 34968861 (-)
G1858575 LOC106613168 other downstream 891691 34839900 ~ 34841662 (-)
G1858519 NA other downstream 911788 34820776 ~ 34821565 (-)
kcnma1a LOC106613356 other downstream 1545483 34177056 ~ 34469529 (-)
G1860462 NA other upstream 713486 36448831 ~ 36451459 (-)
G1861368 NA other upstream 1599682 37335027 ~ 37335414 (-)
G1862272 NA other upstream 2421404 38156749 ~ 38157209 (-)
G1864033 NA other upstream 3714052 39449397 ~ 39453415 (-)

Expression


Co-expression Network