Gene
RNA
| Item | Value |
|---|---|
| gene id | G1860478 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 36465211 ~ 36465522 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2128912 | True | 312 | lncRNA | 0.40 | 1 | 36465211 | 36465522 |
36,462,400
36,462,800
36,463,200
36,463,600
36,464,000
36,464,400
36,464,800
36,465,200
36,465,600
36,466,000
36,466,400
36,466,800
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503110 | LOC106612973 | coding | upstream | 74154 | 36264498 ~ 36391057 (+) |
| sfrp5 | sfrp5 | coding | upstream | 302659 | 36123204 ~ 36166009 (+) |
| crtac1b | crtac1 | coding | upstream | 530214 | 35879332 ~ 35934997 (+) |
| loxl4 | loxl4 | coding | upstream | 650510 | 35757462 ~ 35814701 (+) |
| zgc:123010 | LOC106613015 | coding | upstream | 729519 | 35687052 ~ 35735692 (+) |
| LOC110502664 | avpi1 | coding | downstream | 177598 | 36643120 ~ 36647796 (+) |
| LOC110502667 | LOC105021389 | coding | downstream | 216373 | 36681895 ~ 36692480 (+) |
| LOC110502668 | LOC106612941 | coding | downstream | 229047 | 36591861 ~ 36714947 (+) |
| LOC110502670 | slc25a28 | coding | downstream | 279455 | 36744977 ~ 36763280 (+) |
| LOC110502673 | got1 | coding | downstream | 358362 | 36823884 ~ 36850022 (+) |
| G1860476 | NA | non-coding | upstream | 1091 | 36463900 ~ 36464120 (+) |
| G1860460 | NA | non-coding | upstream | 17350 | 36447583 ~ 36447861 (+) |
| G1859655 | NA | non-coding | upstream | 18502 | 36446264 ~ 36446709 (+) |
| G1859741 | NA | non-coding | upstream | 56764 | 36408202 ~ 36408447 (+) |
| G1859740 | NA | non-coding | upstream | 57170 | 36407615 ~ 36408041 (+) |
| G1860576 | NA | non-coding | downstream | 80525 | 36546047 ~ 36546302 (+) |
| G1860621 | NA | non-coding | downstream | 275574 | 36741096 ~ 36743829 (+) |
| G1860687 | NA | non-coding | downstream | 300578 | 36766100 ~ 36767774 (+) |
| G1860694 | NA | non-coding | downstream | 311153 | 36776675 ~ 36776937 (+) |
| G1859436 | NA | other | upstream | 438225 | 35954168 ~ 36026986 (+) |
| G1859175 | NA | other | upstream | 1048110 | 35416512 ~ 35417101 (+) |
| G1857923 | NA | other | upstream | 1647075 | 34817749 ~ 34818136 (+) |
| G1860679 | NA | other | downstream | 258550 | 36724072 ~ 36724509 (+) |
| LOC110502696 | LOC106613523 | other | downstream | 1572527 | 38038007 ~ 38067483 (+) |
| LOC110502720 | mpc1 | other | downstream | 2983881 | 39449355 ~ 39458454 (+) |
| G1863919 | NA | other | downstream | 3147482 | 39613004 ~ 39613630 (+) |
| LOC110502740 | LOC106613508 | other | downstream | 3382292 | 39847791 ~ 39850264 (+) |
