G1861524


Basic Information

Item Value
gene id G1861524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 37392266 ~ 37393141 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2130077
caacaacacaggtctCCCCAGCATCTCAGACTCATAACACAGACAGTAGCGGAacctatttgctatttatggcctgtaaGCCTCATTGACCTGAGATCATACAACTCGGTTTTGAAGgaaaaaagcataatgtatggattattttgactataacaaatactcagatgaaacatattgtgctatttatcacagactactttgtgtcaaagtttaacaaggactctctcctcctcaccagtgtcatgagcctcaagagcctcacatacagtatatcgtttggtcattgtgctgccacagaattaattgtgagcaaggcctcaaaaaagctttatataccaaagctgcgagaaaagttctatatattattgaaacaatgctgcgattgtttgtgagaatgccaacaggtgttgTTCcatgggggaaagattctattgcgGTAcccgtgggggttgccatggaagccaagaaggggagtgaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctcaaacacacatgtatATGGGgatctgggagaggaagtgtgtccatctgatgaatggacATGTGCCTGAattcaattttatacactaattgtagtctcacccattcatttctaatgaccggcCATTTTAGaccgggaacaccacaggtgtacaaaagttaaataaaacatccAAATGTAATCAAAATCATCAAAAtgtatgacaatcagattaaattaactacatttttcagagagagaacttgtaaatcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2130077 True 789 lncRNA 0.40 2 37392266 37393141

Neighbor

gene id symbol gene type direction distance location
si:dkey-103j14.5 LOC106612836 coding downstream 38242 37339267 ~ 37354024 (-)
LOC110502679 LOC106612855 coding downstream 64591 37302808 ~ 37327675 (-)
LOC110502678 LOC106612863 coding downstream 93791 37292026 ~ 37298475 (-)
slit1a slit1 coding downstream 102781 37125711 ~ 37289485 (-)
LOC110502674 cnnm1 coding downstream 509178 36850124 ~ 36883088 (-)
prim2 prim2 coding upstream 149444 37542585 ~ 37649964 (-)
LOC110502685 LOC106612807 coding upstream 268924 37662065 ~ 37666312 (-)
LOC110502689 LOC106612792 coding upstream 289532 37682673 ~ 37692196 (-)
LOC110502698 LOC106612663 coding upstream 688979 38082120 ~ 38100592 (-)
LOC110502699 LOC106612641 coding upstream 784340 38177481 ~ 38187671 (-)
G1861373 NA non-coding downstream 53714 37338280 ~ 37338552 (-)
G1861371 NA non-coding downstream 54351 37337515 ~ 37337915 (-)
G1861339 NA non-coding downstream 74992 37273204 ~ 37317274 (-)
G1861357 NA non-coding downstream 81519 37310025 ~ 37310747 (-)
G1861320 NA non-coding downstream 165957 37225661 ~ 37226309 (-)
G1861530 NA non-coding upstream 7545 37400686 ~ 37422365 (-)
G1861532 NA non-coding upstream 11235 37404376 ~ 37406279 (-)
G1861588 NA non-coding upstream 102909 37496050 ~ 37496427 (-)
G1861807 NA non-coding upstream 279554 37672695 ~ 37673432 (-)
G1861368 NA other downstream 56852 37335027 ~ 37335414 (-)
G1860462 NA other downstream 940807 36448831 ~ 36451459 (-)
LOC110502661 golga7b other downstream 1433061 35954220 ~ 36014458 (-)
G1859038 NA other downstream 2148677 35243114 ~ 35243589 (-)
G1858636 NA other downstream 2423405 34936689 ~ 34968861 (-)
G1862272 NA other upstream 763608 38156749 ~ 38157209 (-)
G1864033 NA other upstream 2056256 39449397 ~ 39453415 (-)
srsf2a LOC106612293 other upstream 2786688 40179809 ~ 40185223 (-)
G1868010 NA other upstream 5522265 42915406 ~ 42978144 (-)
G1868940 LOC106611807 other upstream 6093727 43486868 ~ 43501433 (-)

Expression


Co-expression Network