G1862159


Basic Information

Item Value
gene id G1862159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 38003849 ~ 38005629 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2130827
tCATAAGTCATAAAAAAGGATTTAATTAAGGCTACCAAAAATCACTGCAAAGGTCACAATTAAACATCATTTTGTTTAATAAAATCAGACACAGCAAAAATAAAACAGACCAAGCTCTCACAGGTAAAGCCCATTAACACGCAGTCGATTAGCTCAGTTTTATAAATAACAAAATTACTTAAACTTGCTAGGCTAAGGTAACATTAGGTATGGTACGGAAAGGTAAGGTACTCAGGCACATAAATGGCATATATGCACTAATTATACGGGTGTTTAAACATTGCATATATATTACTACAAACAAATTTGGTAAACAAATTTAGGGGTGACCAATTCTGGGTGACCATTCAGAAAGTATGGTGCATAAAAAGCACCAGGGGGCAGTATATAGCAATAAATTGGTATCATCAGCACTGTCCAAGTGGAGGTGCAGGCCTTTATTCCTGTGTACTTGTTTGAGCAGGGCAGAATTCTTAACATTGGATTACAATTTGCCCCAGAATCCAACCGATGCCAACCAAAATCAAACAAATGTAGGAGCAATTACTATCATTCTTTAAAGGGATAGTGCAATTTTTTCCCCTGTAGCTGTTCTTGTAGACTTCACACTGTCCCTTTAAAGCAAAATGGAGCTTGTGACATAACAAAGCAGAATGTGACAAGAACAGAATGAAGACATATTGACGGCATAACCCACTGGGCTCAGACGTCAATTCAGCGTCTATTTCAAGTTGGTTCagcgtaatttcattgaaattatgtggaatcaacattgattcaaccagtgtgtgcccagtgggaagtcaATGGTGCCATCTGTCAATGATTTTAGGAGGCGGGATAATGATGATTTAAAGTGTTTCACTATCCAGATCCCTCTACATttgtaagatatccagacacaatgAGTTCCTGACTATCTAAGGGGGTCAGGAAGATCTGATCCCAATCATATCACAATGCATATTTTAATCgtctacacctgtctaaaaatgtgggcacaatcagaatgagaccagatcaggacaaaggacaaatgttagaaccaggtataaactggGCTTGAGAAAGCTCATGGAAGGACGCACATGGATATCTTTGCTATATACCGTACATGTTAAGaggtacttcctgtttccatGACTGAGGGGATACACTGTAAAACATGTGATCTTCCTGAGATTGGAAAGATTAGCTGTTTTTCTGCCTGCTGCCATGTTGGGTCAATAGTTTGGCCCTTTACTAAAAGAATCCCTGCTCCTCATCATGACACCGTAACACATGGATAGATGGCACACCCCTGGCTGGCCAGGGGCCCCAGGGttacctctcttcccctcctccccgtTTAGGCCAGGGGGTCCTGGTTTCCCTGGATGACCTAGTTTACTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2130827 True 1393 lncRNA 0.41 2 38003849 38005629

Neighbor

gene id symbol gene type direction distance location
LOC110502689 LOC106612792 coding downstream 311653 37682673 ~ 37692196 (-)
LOC110502685 LOC106612807 coding downstream 337537 37662065 ~ 37666312 (-)
prim2 prim2 coding downstream 353885 37542585 ~ 37649964 (-)
si:dkey-103j14.5 LOC106612836 coding downstream 649825 37339267 ~ 37354024 (-)
LOC110502679 LOC106612855 coding downstream 676174 37302808 ~ 37327675 (-)
LOC110502698 LOC106612663 coding upstream 76491 38082120 ~ 38100592 (-)
LOC110502699 LOC106612641 coding upstream 171852 38177481 ~ 38187671 (-)
LOC110502701 LOC106612630 coding upstream 186556 38192185 ~ 38271406 (-)
LOC110503074 NA coding upstream 282177 38287806 ~ 38304066 (-)
LOC110502706 fbx9 coding upstream 403254 38408883 ~ 38416607 (-)
G1862155 NA non-coding downstream 35061 37964079 ~ 37968788 (-)
G1862101 NA non-coding downstream 114517 37889056 ~ 37889332 (-)
G1862097 LOC106612695 non-coding downstream 120621 37879515 ~ 37883228 (-)
G1862042 NA non-coding downstream 205767 37787631 ~ 37798082 (-)
G1862019 NA non-coding downstream 242154 37761345 ~ 37761695 (-)
G1862204 NA non-coding upstream 97594 38103223 ~ 38103447 (-)
G1862209 NA non-coding upstream 99251 38104880 ~ 38105095 (-)
G1862213 NA non-coding upstream 102540 38108169 ~ 38108431 (-)
G1862250 NA non-coding upstream 130002 38135631 ~ 38135905 (-)
G1862271 NA non-coding upstream 150765 38156394 ~ 38156622 (-)
G1861368 NA other downstream 668435 37335027 ~ 37335414 (-)
G1860462 NA other downstream 1552390 36448831 ~ 36451459 (-)
LOC110502661 golga7b other downstream 2044644 35954220 ~ 36014458 (-)
G1859038 NA other downstream 2760260 35243114 ~ 35243589 (-)
G1858636 NA other downstream 3034988 34936689 ~ 34968861 (-)
G1862272 NA other upstream 151120 38156749 ~ 38157209 (-)
G1864033 NA other upstream 1443768 39449397 ~ 39453415 (-)
srsf2a LOC106612293 other upstream 2174200 40179809 ~ 40185223 (-)
G1868010 NA other upstream 4909777 42915406 ~ 42978144 (-)
G1868940 LOC106611807 other upstream 5481239 43486868 ~ 43501433 (-)

Expression


Co-expression Network