Gene
RNA
| Item | Value |
|---|---|
| gene id | G1862608 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 38280668 ~ 38280910 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: piggyBac transposable element-derived protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2131302 | True | 243 | lncRNA | 0.46 | 1 | 38280668 | 38280910 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502701 | LOC106612630 | coding | downstream | 9262 | 38192185 ~ 38271406 (-) |
| LOC110502699 | LOC106612641 | coding | downstream | 92997 | 38177481 ~ 38187671 (-) |
| LOC110502698 | LOC106612663 | coding | downstream | 180076 | 38082120 ~ 38100592 (-) |
| LOC110502689 | LOC106612792 | coding | downstream | 588472 | 37682673 ~ 37692196 (-) |
| LOC110502685 | LOC106612807 | coding | downstream | 614356 | 37662065 ~ 37666312 (-) |
| LOC110503074 | NA | coding | upstream | 6896 | 38287806 ~ 38304066 (-) |
| LOC110502706 | fbx9 | coding | upstream | 127973 | 38408883 ~ 38416607 (-) |
| LOC110502709 | LOC106589793 | coding | upstream | 158089 | 38438531 ~ 38451320 (-) |
| LOC110502710 | LOC106612554 | coding | upstream | 196213 | 38477123 ~ 38533846 (-) |
| mcph1 | mcph1 | coding | upstream | 255224 | 38536134 ~ 38585926 (-) |
| G1862607 | NA | non-coding | downstream | 653 | 38279777 ~ 38280015 (-) |
| G1862289 | NA | non-coding | downstream | 112038 | 38168428 ~ 38168630 (-) |
| G1862274 | NA | non-coding | downstream | 122445 | 38157931 ~ 38158223 (-) |
| G1862271 | NA | non-coding | downstream | 124046 | 38156394 ~ 38156622 (-) |
| G1862250 | NA | non-coding | downstream | 144763 | 38135631 ~ 38135905 (-) |
| G1862611 | NA | non-coding | upstream | 1521 | 38282431 ~ 38282686 (-) |
| G1862629 | NA | non-coding | upstream | 31894 | 38312804 ~ 38313447 (-) |
| G1862557 | LOC106612605 | non-coding | upstream | 48338 | 38329248 ~ 38336239 (-) |
| G1862558 | NA | non-coding | upstream | 66475 | 38347385 ~ 38387340 (-) |
| G1862643 | LOC106595915 | non-coding | upstream | 78223 | 38359133 ~ 38362865 (-) |
| G1862272 | NA | other | downstream | 123459 | 38156749 ~ 38157209 (-) |
| G1861368 | NA | other | downstream | 945254 | 37335027 ~ 37335414 (-) |
| G1860462 | NA | other | downstream | 1829209 | 36448831 ~ 36451459 (-) |
| LOC110502661 | golga7b | other | downstream | 2321463 | 35954220 ~ 36014458 (-) |
| G1859038 | NA | other | downstream | 3037079 | 35243114 ~ 35243589 (-) |
| G1864033 | NA | other | upstream | 1168487 | 39449397 ~ 39453415 (-) |
| srsf2a | LOC106612293 | other | upstream | 1898919 | 40179809 ~ 40185223 (-) |
| G1868010 | NA | other | upstream | 4634496 | 42915406 ~ 42978144 (-) |
| G1868940 | LOC106611807 | other | upstream | 5205958 | 43486868 ~ 43501433 (-) |
| G1872165 | NA | other | upstream | 7747010 | 46027920 ~ 46029807 (-) |
