G1862552 (elovl2)


Basic Information

Item Value
gene id G1862552
gene name elovl2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 38396054 ~ 38402073 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2131244
TGGATCCACAACTTTATTTTATAAGACATGGCAAACTTTTCTTTCTTTTGTTGAAACCGAAACCGGTGTCAGATTGATTATGTACCTGAGTTTAGATTTGTACTAGTGTGTATATACTCATGACGGGAACCTCATTAAGAGGATACAAAGAAAAGAAAATCCTTGAGGAACATTGGGAAGGGAGGGTGGGAATGATACGGACACATAGTGTAAAAAAGAAAAAGATCACTATCTATTACTGGTATGTTAGGTAATAATGCTCAGCCATAAGCCAGTTTGTTTTTTATCTTTCCTTTCTTGTATTCAAAGCCATTTTGGAACACTAATCAGTATCTAATTATTTATGTTGATATTGTACAGCTTGTGTATTTTAATGCATTTTTTTGAAGCAACTCTTTTGCATACTTATAAATGATTGTATGACCTTGtggtcaaataaaatatattgagAGAAAAAAACCCAGATATAGTACCTTTTACAAAACAGAATccccaaaatatgtttttttccctcatggACAAGCATGTAGACAAGTGCATATGTTGTGAATTAAAACATAGAAAATAAGTTATTATTTCTGTATGGGTCAAGGTTGATTAAAGCTTTGTCCCCACCACACTGAAGACAGACAAAGTTGAACATCTTGTGCAGCATTAAAAGGAAGTGGGTCTCTGTGGTTACTGTGCTGTAGTTTACTCCCTATGCTATGCTTGTTTagaaactctaatgaactttgATTCAATATGAATAATAACAGGTTGCGGTGTGCAAAATGTTAGGAATCTCTTTCAGATAAACATGTCTTGTCTTTTGTGAATTAACTAGCTTAGACTCTTCTAATACATTTCGTCATTAGTAATCCTCATGAAGAAATGTATTATCCCTTCTCTCCTGGCGACAttacatacagtagatatgtCTTACAGTTAGGATTGTAACAGTATTCAAGATTCAGTCCCCCCTCACTTTCCTGTGTGTAATGGTTTCCGTGGGTGTCACCCCATTCACATGGCCATTCAATGAAGCAACAGAGCCATTCTGATGATACTCCTTCTTTTGTGAAACAAGGTGTTTCTTGTAAGTCTGAATGTAGAAGTTTGAGAAAAGGGCAATAAGTGTGATGACATAGAATATCTGGAAATACAGCCACCCTCTGGGGAAATCACATGGCCAAATGACTGCACATATCGTCTGGGACATGGTCAAAAAGAACTGAATCAGCTGTACTTGTGTGATGTATTTCTTCCACCATAGATAGGGCCGCAAGGCCGGGACAGCAGAGAGCCCATAGTAAGAGTACATCAGGACATGGATGAAGCTGTTCAGGGAGGCACCAAAGTAGGAGTGACCACAGGGCACCCAGTTCATGACGAACCACCAGATGTTGAGCATGCTAGCAtggtggtagatgtgcagaaacGTGATTTGATGGTTGTTCTTCCGCAGGATGAAGAAGAAGGTATCCATAAACTCTATGAGCTTGGAGAAGTAGTACCACCACAGCACATTTATGATCTGAAATGAGAAAAAAAGCGAAGAATAAGGAGTCAAGCTTTCAGCCAATACAATACTTTTTCTAGTCGTTCACTTTCCTGCAAGGATATACTCAATACTCATACATTTCCAGTTTTATATTTCACCCTATGAGGAATGGCCAGTGATAATCATTTGACCAGTTGTGTTGAGGGACAAAAAATGGTCATCTGTACTGAAATAATCTTGAAATCTCTATTAAGGACACAAATAAAAATATGATCATCC

Function

symbol description
elovl2 Predicted to enable fatty acid elongase activity. Acts upstream of or within very long-chain fatty acid biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane. Is expressed in several structures, including fat cell; head; liver; pleuroperitoneal region; and yolk syncytial layer. Orthologous to human ELOVL2 (ELOVL fatty acid elongase 2).

NR:

description
elongation of very long chain fatty acids protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2131244 True 1762 lncRNA 0.38 4 38396054 38402073

Neighbor

gene id symbol gene type direction distance location
LOC110503074 NA coding downstream 91988 38287806 ~ 38304066 (-)
LOC110502701 LOC106612630 coding downstream 124648 38192185 ~ 38271406 (-)
LOC110502699 LOC106612641 coding downstream 208383 38177481 ~ 38187671 (-)
LOC110502698 LOC106612663 coding downstream 295462 38082120 ~ 38100592 (-)
LOC110502689 LOC106612792 coding downstream 703858 37682673 ~ 37692196 (-)
LOC110502706 fbx9 coding upstream 6810 38408883 ~ 38416607 (-)
LOC110502709 LOC106589793 coding upstream 36926 38438531 ~ 38451320 (-)
LOC110502710 LOC106612554 coding upstream 75050 38477123 ~ 38533846 (-)
mcph1 mcph1 coding upstream 134061 38536134 ~ 38585926 (-)
myom2b LOC106612511 coding upstream 956990 39359063 ~ 39384164 (-)
G1862558 NA non-coding downstream 8714 38347385 ~ 38387340 (-)
G1862643 LOC106595915 non-coding downstream 33189 38359133 ~ 38362865 (-)
G1862557 LOC106612605 non-coding downstream 59815 38329248 ~ 38336239 (-)
G1862629 NA non-coding downstream 82607 38312804 ~ 38313447 (-)
G1862611 NA non-coding downstream 113368 38282431 ~ 38282686 (-)
G1862662 NA non-coding upstream 3814 38405887 ~ 38408243 (-)
G1862668 NA non-coding upstream 26317 38428390 ~ 38429346 (-)
G1862672 NA non-coding upstream 29142 38431215 ~ 38431430 (-)
G1862675 NA non-coding upstream 30696 38432769 ~ 38433782 (-)
G1862678 NA non-coding upstream 33329 38435402 ~ 38435690 (-)
G1862272 NA other downstream 238845 38156749 ~ 38157209 (-)
G1861368 NA other downstream 1060640 37335027 ~ 37335414 (-)
G1860462 NA other downstream 1944595 36448831 ~ 36451459 (-)
LOC110502661 golga7b other downstream 2436849 35954220 ~ 36014458 (-)
G1859038 NA other downstream 3152465 35243114 ~ 35243589 (-)
G1864033 NA other upstream 1047324 39449397 ~ 39453415 (-)
srsf2a LOC106612293 other upstream 1777756 40179809 ~ 40185223 (-)
G1868010 NA other upstream 4513333 42915406 ~ 42978144 (-)
G1868940 LOC106611807 other upstream 5084795 43486868 ~ 43501433 (-)
G1872165 NA other upstream 7625847 46027920 ~ 46029807 (-)

Expression


Co-expression Network