G1864032


Basic Information

Item Value
gene id G1864032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 39445519 ~ 39450996 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2132815
agtcgatagcgcgccgtacctcgggctcgaaggtccgagacctgctccctgctgtttcattacaatactatgaaagtttggaTGTGATCACCATagaagttcaaagatgaaaaggcctggaaagaggagagatgactagaaacgattcggttggccgttttaatgtttggattaattgtcagagtagaggaccttgtgcttttcaggtTCTCAGACACTAGTGCATAGTCAACCAAGAACAGCTGTCTCAGAGTCATCTTATAAGATAGGATGTACAGCTTGTGAAGAAGTACCTTCAGCATGCACAAAACACTCAAGATCTATACAAGCCACAGCAGCACAAGGAGAGGCATTGATCAAGCAAGTTGTACTGTCAAAATGATGAATATATTCTAAAGGTAAGTCTGTAGTATTCACCCTATGTAACCTGTTTTGTCATATTGGTGTGTATCCCATATTCTTATTATGGAGCAACTAAAGCTCCATTGTGGGCTTAGGTTGATTGATAAACCATTCCTGAATCCTGTGTGCTTCTACCTGTAATTCTATGATATCTCAATGTGTGAGTACACTGAATACTGTTGagatttcttgtttgtttcacatagCTTCTTTACTACTTGACTTGCACATAAATAAATCAGAAACAAAGGCATCCAAGGTGGCATTCTACTGTAGGTGTTTTTTGTTGTCCCTGTTCAAAATATGAACAATAAATGTAAATACTCATGTGCATTCATATCGGTTTCATACTGTTTAGAGATGAATTTTCTGAAAAAATAAGTAATTTTACAGACGGCAAAACAAGGTAATGCCGATAAAGGCAATGTATTTGCTAATACAACAAATACTTCCTTCCAAAAAGTCACTTCAGATCAGGTATAAAACACTTACATCTGttgtgtattaaaaataaaatagacATTTACACAAATGAATAGACAAAATAATGGATAATGTagaaacaaatacatttgtttgATCAAATAACTTAAATAAGTCACATTTAAAATTAATAACTTACATTGGCAATTTATAAATGGGTCTTTTCAGTAAACCCTCCAAACACACAGAATGCTGTTAGAAATGGCCAAAACTATAAAAAGCATCCAAAATAATGCTCACTAGATTTTTACAGAAAATAAATATTGTAGATTACAGTATATCAAACCTTATGAACCAGCCTGAAAATCAACAACAGATGCATACATATACTCTTTGTGGTCATTTAGCCATTTCAGTTTTTGTTACAAAAATGTACCAACGTATCCTTAGCAGCTGTAGCTGAACATTTCCAAAAATCTGTCAGCAATTACTCTCCCAGATGAAGAATAATAAAAGTAACACTCCAACATGCcacagagagaaatacagatgTCCGATGTTGATAAAATCCCGTAAATGTAGTTAGTTATATGTAGTTATAAACTGTTCTCAACTTCTCTGTTACAGCCTTTATGAGTGTCAACTTGAGGTTCTGTAAGATTACTTGGTCTCCTAGATAATATATGAAACATACTCTTCATAATACAAAGGTGTCAAATAATTTAATAGTAGCAGATGGCACCTAAAGGAAAAGGCAAATATGAATGAATAAAatatatgaacatttgaacatcattCTGGTTGGTCTTTTAATACCACCATTTGTTTCTAGTGCATCTAAAATCCGTAAAGATTTCTTTCTTAGTGCAACAACCGGATGTATCTTCTCtaaatgtttttcttcttctgATAAGTTGCTCCTCCTTGCTCCCACTACTGTGGACTTCCTGGTATTTTGGACGGGCACTTAAACCAGTGTCTGATGAAAGTCATTGCACTTTGACCCCTTTTCAAGCTCTGTCCCCGAATCATCGATGAGGGTGCTATAAACCAGTGGATGTGAgtctcttcattcctcttctctgCGCCAAACTTGAAGACTCCACAGGCTCCAGCTTTGGGGCCAGAGGCAAACGATTCAAAGCCAAGTATGTTGCAGCCATTGCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2132815 True 1993 lncRNA 0.37 4 39445519 39450996

Neighbor

gene id symbol gene type direction distance location
myom2b LOC106612511 coding downstream 61355 39359063 ~ 39384164 (-)
mcph1 mcph1 coding downstream 859593 38536134 ~ 38585926 (-)
LOC110502710 LOC106612554 coding downstream 911673 38477123 ~ 38533846 (-)
LOC110502709 LOC106589793 coding downstream 994199 38438531 ~ 38451320 (-)
LOC110502706 fbx9 coding downstream 1028912 38408883 ~ 38416607 (-)
LOC110502717 LOC106612488 coding upstream 6776 39457772 ~ 39473633 (-)
irf1a LOC106612476 coding upstream 63306 39514302 ~ 39517763 (-)
tacr2 LOC106612452 coding upstream 209919 39660915 ~ 39666026 (-)
hnrnph3 hnrh3 coding upstream 315795 39766791 ~ 39772600 (-)
dna2 dna2 coding upstream 326386 39777382 ~ 39811785 (-)
G1864068 LOC106612512 non-coding downstream 12660 39431458 ~ 39432859 (-)
G1864039 NA non-coding downstream 51073 39393281 ~ 39394446 (-)
G1863977 NA non-coding downstream 166372 39278898 ~ 39279147 (-)
G1863654 NA non-coding downstream 228912 39216354 ~ 39216607 (-)
G1863648 NA non-coding downstream 233552 39211664 ~ 39211967 (-)
G1864091 NA non-coding upstream 67748 39518744 ~ 39521699 (-)
G1864107 NA non-coding upstream 124180 39575176 ~ 39576072 (-)
G1864106 NA non-coding upstream 125824 39576820 ~ 39577358 (-)
G1864127 NA non-coding upstream 144785 39595781 ~ 39609326 (-)
G1864134 NA non-coding upstream 159575 39610571 ~ 39611460 (-)
G1862272 NA other downstream 1288310 38156749 ~ 38157209 (-)
G1861368 NA other downstream 2110105 37335027 ~ 37335414 (-)
G1860462 NA other downstream 2994060 36448831 ~ 36451459 (-)
LOC110502661 golga7b other downstream 3486314 35954220 ~ 36014458 (-)
G1859038 NA other downstream 4201930 35243114 ~ 35243589 (-)
srsf2a LOC106612293 other upstream 728833 40179809 ~ 40185223 (-)
G1868010 NA other upstream 3464410 42915406 ~ 42978144 (-)
G1868940 LOC106611807 other upstream 4035872 43486868 ~ 43501433 (-)
G1872165 NA other upstream 6576924 46027920 ~ 46029807 (-)
G1872556 NA other upstream 7346239 46797235 ~ 46797650 (-)

Expression


Co-expression Network