G1864127


Basic Information

Item Value
gene id G1864127
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 39595781 ~ 39609326 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2132928
cctatggacagagtctcccacctcagctgcagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcgcacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaagctaaaactgatagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2132928 True 617 lncRNA 0.43 2 39595781 39609326

Neighbor

gene id symbol gene type direction distance location
irf1a LOC106612476 coding downstream 78018 39514302 ~ 39517763 (-)
LOC110502717 LOC106612488 coding downstream 122148 39457772 ~ 39473633 (-)
myom2b LOC106612511 coding downstream 211617 39359063 ~ 39384164 (-)
mcph1 mcph1 coding downstream 1009855 38536134 ~ 38585926 (-)
LOC110502710 LOC106612554 coding downstream 1061935 38477123 ~ 38533846 (-)
tacr2 LOC106612452 coding upstream 51589 39660915 ~ 39666026 (-)
hnrnph3 hnrh3 coding upstream 157465 39766791 ~ 39772600 (-)
dna2 dna2 coding upstream 168056 39777382 ~ 39811785 (-)
LOC110502743 LOC106612385 coding upstream 338158 39947484 ~ 39958097 (-)
LOC110502744 LOC106612365 coding upstream 399057 40008383 ~ 40072508 (-)
G1864106 NA non-coding downstream 18423 39576820 ~ 39577358 (-)
G1864107 NA non-coding downstream 19709 39575176 ~ 39576072 (-)
G1864091 NA non-coding downstream 74082 39518744 ~ 39521699 (-)
G1864032 NA non-coding downstream 144785 39445519 ~ 39450996 (-)
G1864068 LOC106612512 non-coding downstream 162922 39431458 ~ 39432859 (-)
G1864134 NA non-coding upstream 1245 39610571 ~ 39611460 (-)
G1864135 NA non-coding upstream 5766 39615092 ~ 39615376 (-)
G1864136 NA non-coding upstream 9908 39619234 ~ 39619519 (-)
G1864138 NA non-coding upstream 10905 39620231 ~ 39620461 (-)
G1864139 NA non-coding upstream 11523 39620849 ~ 39621092 (-)
G1864033 NA other downstream 142366 39449397 ~ 39453415 (-)
G1862272 NA other downstream 1438572 38156749 ~ 38157209 (-)
G1861368 NA other downstream 2260367 37335027 ~ 37335414 (-)
G1860462 NA other downstream 3144322 36448831 ~ 36451459 (-)
LOC110502661 golga7b other downstream 3636576 35954220 ~ 36014458 (-)
srsf2a LOC106612293 other upstream 570503 40179809 ~ 40185223 (-)
G1868010 NA other upstream 3306080 42915406 ~ 42978144 (-)
G1868940 LOC106611807 other upstream 3877542 43486868 ~ 43501433 (-)
G1872165 NA other upstream 6418594 46027920 ~ 46029807 (-)
G1872556 NA other upstream 7187909 46797235 ~ 46797650 (-)

Expression


Co-expression Network