Gene
RNA
| Item | Value |
|---|---|
| gene id | G1864134 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 39610571 ~ 39611460 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein LDOC1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2132938 | True | 890 | lncRNA | 0.44 | 1 | 39610571 | 39611460 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| irf1a | LOC106612476 | coding | downstream | 92808 | 39514302 ~ 39517763 (-) |
| LOC110502717 | LOC106612488 | coding | downstream | 136938 | 39457772 ~ 39473633 (-) |
| myom2b | LOC106612511 | coding | downstream | 226407 | 39359063 ~ 39384164 (-) |
| mcph1 | mcph1 | coding | downstream | 1024645 | 38536134 ~ 38585926 (-) |
| LOC110502710 | LOC106612554 | coding | downstream | 1076725 | 38477123 ~ 38533846 (-) |
| tacr2 | LOC106612452 | coding | upstream | 49455 | 39660915 ~ 39666026 (-) |
| hnrnph3 | hnrh3 | coding | upstream | 155331 | 39766791 ~ 39772600 (-) |
| dna2 | dna2 | coding | upstream | 165922 | 39777382 ~ 39811785 (-) |
| LOC110502743 | LOC106612385 | coding | upstream | 336024 | 39947484 ~ 39958097 (-) |
| LOC110502744 | LOC106612365 | coding | upstream | 396923 | 40008383 ~ 40072508 (-) |
| G1864127 | NA | non-coding | downstream | 1245 | 39595781 ~ 39609326 (-) |
| G1864106 | NA | non-coding | downstream | 33213 | 39576820 ~ 39577358 (-) |
| G1864107 | NA | non-coding | downstream | 34499 | 39575176 ~ 39576072 (-) |
| G1864091 | NA | non-coding | downstream | 88872 | 39518744 ~ 39521699 (-) |
| G1864032 | NA | non-coding | downstream | 159575 | 39445519 ~ 39450996 (-) |
| G1864135 | NA | non-coding | upstream | 3632 | 39615092 ~ 39615376 (-) |
| G1864136 | NA | non-coding | upstream | 7774 | 39619234 ~ 39619519 (-) |
| G1864138 | NA | non-coding | upstream | 8771 | 39620231 ~ 39620461 (-) |
| G1864139 | NA | non-coding | upstream | 9389 | 39620849 ~ 39621092 (-) |
| G1864211 | NA | non-coding | upstream | 103235 | 39714695 ~ 39716578 (-) |
| G1864033 | NA | other | downstream | 157156 | 39449397 ~ 39453415 (-) |
| G1862272 | NA | other | downstream | 1453362 | 38156749 ~ 38157209 (-) |
| G1861368 | NA | other | downstream | 2275157 | 37335027 ~ 37335414 (-) |
| G1860462 | NA | other | downstream | 3159112 | 36448831 ~ 36451459 (-) |
| LOC110502661 | golga7b | other | downstream | 3651366 | 35954220 ~ 36014458 (-) |
| srsf2a | LOC106612293 | other | upstream | 568369 | 40179809 ~ 40185223 (-) |
| G1868010 | NA | other | upstream | 3303946 | 42915406 ~ 42978144 (-) |
| G1868940 | LOC106611807 | other | upstream | 3875408 | 43486868 ~ 43501433 (-) |
| G1872165 | NA | other | upstream | 6416460 | 46027920 ~ 46029807 (-) |
| G1872556 | NA | other | upstream | 7185775 | 46797235 ~ 46797650 (-) |
