G1864291


Basic Information

Item Value
gene id G1864291
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 39850656 ~ 39853367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2133110
actggacgctgTGCTcagactgggcatcggcgcaggaGAAAGCTCCGGTCATggagctggaggttccggaccgtggaccgtctcaggaggttccataCCGTGGAccatctcaggaggttccggaccgtggaccgtctcaggaggttccggactgtggaccatgtcaggaggttccggactgggaagctctggactggggatcgTCGCAGGAAGCCTGGTGAGTGGGGCCGGCACTGGTGGCACCGGGCTGGTGACAAGCACCCCAGGGCgtgtgcggggagcaggcacaggacgtagcTGACTGGGAAGGTGCAcctgagggagagtgcgaggagcaggcacaggacgtaccggacaggggacacgcacttcagggagagtgcgagaggagaggaggaggcacaggacgtactgggctgtggaggcgcactggagacctggtgcgtagaaCCGGCACAAATTGTACCGGAACAATGACACACTTCGCacggcgagtgcggggagctggcacaggacgtacccgggttgtggaggcgtactggagacctggtgggTGGAACTGGCACAGATGGTACGGGACCAATGACACGCTCCTCAGGACAAGTATGGGGAGAtggcacaggtggcaccggacggCTAACACGCTCCTCAGGGCGAATGCCGTGCATACTATgccaaaccaacagctctctcgcttcactctcctccaatttatCCAACAACTCATCGAAGGTCTCTAACTCACccctccgttcactctcctccaatttgtcCAATAACTCCTCGACGGTCTCTGACTCACTCTGTTCGCTGTCCTTTTTGGGACTGTCTTTTGGGCTTGCGTCGTGGCAGCGAACCCCGGCGTCGTCGctgtccttccttctctccctgcgTCTGCTTCCACGGAAGGCTTTCGTCTCCAGCCataatttcctcccaagtccagaatGTCTTCTCCTTTTTTCTCTCCTCCCATTCCCAGTGTCTAGTGTCGGTGGCGGAATATTCCCAAAAGTGTAAACTCCAAGCTAAATCAAGTGATCCTCAAATAATTTCTAATATTTTGAAGTATTTTAAGTAATGTATTTGCCGCAGGTCTGATCACTACTGTGTCTTACCACTTAAGTTGCCACGTTTTGCAATCAATGTACCTCTTTAAATGAATGTATATTAATGTCTATATATAAAGATTGTGTACAGTATAGTTTATTGGGAGATGTTAATTTGTACtttttttgtatttgagattTCCTGTTTAAATGATTCAACTAGAGAATTTTTTACATTTGATATAGCTATCCGTCCGTTTCCTTGctgcaaaataatgttttttgacTTTACAGAACATCCTCTGCATTACCATTCTGTATCAATCTCTTTCTGTTGGGTAGATTTAATGtgcatccgaaatggcaccctatttccaatATAGTGCCCTGCCTTTTGAAAGTAGTGTACTAAGTAATGTATAAGGTTTCATTTGGGACACCATCTTACATTCCTGTGGGGAAACGTTGTGTGCAGCTAGCTATTAGTCAGTCACAGCATTGCCGTGGCTTTTATTTCAGTGCCTTTATTTCAACATCAATATATCTCTGTAATGGTGTCATGACTGACCACGagaatccaaataggtcagattAAGTTTGCAATTAATTACTTCAATCAGACCCCCTTTCACCCgtagagggggaggaaagaactAGTGGGGATTGACACTCACGTCCTGTTTTAAATCGAGGGAGAAGATCCAGGCCTGTGCTCTCCAAATTCATCTAAGGAATGTGCTTTGTCTCAACAGACCTTTTTGCAGCTGAAACTCTAACACGTTCAAAagcgaatactggaacaatattttgAACGTAGAACGTGTGGAATAGTCaggtgacagggtagcctagtggttagagtgttggactagtaaccggaaggttgcaagttcaaacccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcctaggccgtcattgaaaataagaattttttcttaactgacttgcctagtaaaataaaaagacTGTTATGTTATTTTGTGAGGAAATACTGTAAATTGGAAAGTATACATTACATAGATAGAGTTTCCATACTATGGGTTGTGCATGTAATATGAAAAATTATAGAAGTGTTTTTGTTAAAAGAGGGTTGTGATTTGAGAAGCTATAACAGATCATTTTTTTTGCCATAACTTTGCACAGTGAGTAATCACCGCAAAGTTATGGCAGCCAGCCAGCTGGAACCACCCCTTTCGCGCAAAATGTATAAATGATGGGGTTCAAATTAACACATGGAACCAGAAAAAGTGTAAAGTGGCAGCTACGCGTTTACAATGGTTTGAACTTTGAATCTCAACACGAGGTCGAGACGATAGATTCACCTCATGAGTTCTTGCTCAAAGCGGACGTCGGtttgtgtgcaaagtatatggttATTGTAGGCGAGAGTAGTTTCTGAACATGGCAATGttaagtgtctctgtccctctctctccctctccatctcttctttaacaacatccatgttgttgtcattccgctagggacctgttttcagTGTAATAAGTCTCCTGTCAATAACTGGTGCAGATTGTGTGTGTTTATCCTGTGTTCCCATttaattagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2133110 True 2673 TUCP 0.46 2 39850656 39853367

Neighbor

gene id symbol gene type direction distance location
LOC110502740 LOC106613508 coding upstream 1298 39847791 ~ 39850264 (+)
pbld LOC106612403 coding upstream 73026 39773339 ~ 39777630 (+)
rufy2 rufy2 coding upstream 88120 39745766 ~ 39762702 (+)
tspan15 LOC106612421 coding upstream 136459 39669158 ~ 39714197 (+)
hk1 LOC106612430 coding upstream 188180 39621040 ~ 39662476 (+)
LOC110502741 pgs1 coding downstream 105798 39959165 ~ 39979754 (+)
timp2a LOC106612362 coding downstream 219050 40072417 ~ 40086406 (+)
arl3b arl3 coding downstream 248900 40102267 ~ 40124134 (+)
rnf157 LOC106612253 coding downstream 343044 40196411 ~ 40231649 (+)
lrrc59 LOC106612247 coding downstream 391859 40245226 ~ 40251129 (+)
G1864234 NA non-coding upstream 65672 39778491 ~ 39784984 (+)
G1864222 NA non-coding upstream 126030 39724423 ~ 39724626 (+)
G1863942 NA non-coding upstream 183831 39666617 ~ 39666825 (+)
G1863932 NA non-coding upstream 208033 39640828 ~ 39642623 (+)
G1864299 NA non-coding downstream 5690 39859057 ~ 39860842 (+)
G1864345 NA non-coding downstream 55595 39908962 ~ 39925991 (+)
G1864421 NA non-coding downstream 165610 40018977 ~ 40036224 (+)
G1864438 NA non-coding downstream 188905 40042272 ~ 40042520 (+)
G1864444 NA non-coding downstream 199817 40053184 ~ 40053543 (+)
G1863919 NA other upstream 237026 39613004 ~ 39613630 (+)
LOC110502720 mpc1 other upstream 392276 39449355 ~ 39458454 (+)
LOC110502696 LOC106613523 other upstream 1804821 38038007 ~ 38067483 (+)
G1860679 NA other upstream 3126147 36724072 ~ 36724509 (+)
G1864542 NA other downstream 337667 40191034 ~ 40191431 (+)
LOC110502758 LOC106604997 other downstream 487282 40290482 ~ 40342112 (+)
G1864605 NA other downstream 517766 40371133 ~ 40376212 (+)
G1864727 LOC106612143 other downstream 718525 40571892 ~ 40580884 (+)
nog3 nog other downstream 1118046 40971413 ~ 40992948 (+)

Expression

G1864291 Expression in all Baseline Samples

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G1864291 Expression in each Bioproject

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G1864291 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network