Gene
RNA
| Item | Value |
|---|---|
| gene id | G1865206 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 40048272 ~ 40049044 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2134093 | True | 773 | lncRNA | 0.47 | 1 | 40048272 | 40049044 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502743 | LOC106612385 | coding | downstream | 90175 | 39947484 ~ 39958097 (-) |
| dna2 | dna2 | coding | downstream | 236487 | 39777382 ~ 39811785 (-) |
| hnrnph3 | hnrh3 | coding | downstream | 275672 | 39766791 ~ 39772600 (-) |
| tacr2 | LOC106612452 | coding | downstream | 382246 | 39660915 ~ 39666026 (-) |
| irf1a | LOC106612476 | coding | downstream | 530509 | 39514302 ~ 39517763 (-) |
| sfxn2 | sfxn2 | coding | upstream | 47052 | 40096096 ~ 40102224 (-) |
| trim8b | trim8 | coding | upstream | 86778 | 40135822 ~ 40143175 (-) |
| LOC110502750 | LOC106612307 | coding | upstream | 105961 | 40155005 ~ 40177932 (-) |
| srsf2a | LOC106612293 | coding | upstream | 130765 | 40179809 ~ 40185223 (-) |
| nat9 | nat9 | coding | upstream | 202187 | 40251231 ~ 40254320 (-) |
| G1865202 | NA | non-coding | downstream | 5230 | 40042803 ~ 40043042 (-) |
| G1865201 | NA | non-coding | downstream | 5496 | 40042561 ~ 40042776 (-) |
| G1864211 | NA | non-coding | downstream | 331694 | 39714695 ~ 39716578 (-) |
| G1864139 | NA | non-coding | downstream | 427180 | 39620849 ~ 39621092 (-) |
| G1864138 | NA | non-coding | downstream | 427811 | 39620231 ~ 39620461 (-) |
| G1865210 | NA | non-coding | upstream | 6147 | 40055191 ~ 40055420 (-) |
| G1865214 | NA | non-coding | upstream | 11926 | 40060970 ~ 40061456 (-) |
| G1865216 | NA | non-coding | upstream | 15659 | 40064703 ~ 40064914 (-) |
| G1865244 | NA | non-coding | upstream | 76156 | 40125200 ~ 40173253 (-) |
| G1865291 | LOC106612253 | non-coding | upstream | 156071 | 40205115 ~ 40207803 (-) |
| G1864033 | NA | other | downstream | 594857 | 39449397 ~ 39453415 (-) |
| G1862272 | NA | other | downstream | 1891063 | 38156749 ~ 38157209 (-) |
| G1861368 | NA | other | downstream | 2712858 | 37335027 ~ 37335414 (-) |
| G1860462 | NA | other | downstream | 3596813 | 36448831 ~ 36451459 (-) |
| LOC110502661 | golga7b | other | downstream | 4089067 | 35954220 ~ 36014458 (-) |
| G1868010 | NA | other | upstream | 2866362 | 42915406 ~ 42978144 (-) |
| G1868940 | LOC106611807 | other | upstream | 3437824 | 43486868 ~ 43501433 (-) |
| G1872165 | NA | other | upstream | 5978876 | 46027920 ~ 46029807 (-) |
| G1872556 | NA | other | upstream | 6748191 | 46797235 ~ 46797650 (-) |
