Gene
RNA
| Item | Value |
|---|---|
| gene id | G1864459 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 40082790 ~ 40096508 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sideroflexin-2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2133288 | True | 428 | lncRNA | 0.37 | 2 | 40082790 | 40096508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502741 | pgs1 | coding | upstream | 103036 | 39959165 ~ 39979754 (+) |
| LOC110502740 | LOC106613508 | coding | upstream | 233432 | 39847791 ~ 39850264 (+) |
| pbld | LOC106612403 | coding | upstream | 305160 | 39773339 ~ 39777630 (+) |
| rufy2 | rufy2 | coding | upstream | 320254 | 39745766 ~ 39762702 (+) |
| tspan15 | LOC106612421 | coding | upstream | 368593 | 39669158 ~ 39714197 (+) |
| arl3b | arl3 | coding | downstream | 5759 | 40102267 ~ 40124134 (+) |
| rnf157 | LOC106612253 | coding | downstream | 99903 | 40196411 ~ 40231649 (+) |
| lrrc59 | LOC106612247 | coding | downstream | 148718 | 40245226 ~ 40251129 (+) |
| LOC110502758 | LOC106604997 | coding | downstream | 193974 | 40290482 ~ 40342112 (+) |
| slc9a3r1a | slc9a3r1 | coding | downstream | 246056 | 40342564 ~ 40380201 (+) |
| G1864448 | NA | non-coding | upstream | 19488 | 40062862 ~ 40063302 (+) |
| G1864444 | NA | non-coding | upstream | 29247 | 40053184 ~ 40053543 (+) |
| G1864438 | NA | non-coding | upstream | 40270 | 40042272 ~ 40042520 (+) |
| G1864421 | NA | non-coding | upstream | 46566 | 40018977 ~ 40036224 (+) |
| G1864345 | NA | non-coding | upstream | 156799 | 39908962 ~ 39925991 (+) |
| G1864407 | NA | non-coding | downstream | 27903 | 40124411 ~ 40124959 (+) |
| G1864488 | NA | non-coding | downstream | 58567 | 40155075 ~ 40156231 (+) |
| G1864544 | NA | non-coding | downstream | 98509 | 40195017 ~ 40195334 (+) |
| G1864518 | NA | non-coding | downstream | 136000 | 40232508 ~ 40232909 (+) |
| G1864509 | NA | non-coding | downstream | 141445 | 40237953 ~ 40239742 (+) |
| G1864291 | NA | other | upstream | 229423 | 39850656 ~ 39853367 (+) |
| G1863919 | NA | other | upstream | 469160 | 39613004 ~ 39613630 (+) |
| LOC110502720 | mpc1 | other | upstream | 624410 | 39449355 ~ 39458454 (+) |
| LOC110502696 | LOC106613523 | other | upstream | 2036955 | 38038007 ~ 38067483 (+) |
| G1864542 | NA | other | downstream | 94526 | 40191034 ~ 40191431 (+) |
| G1864605 | NA | other | downstream | 274625 | 40371133 ~ 40376212 (+) |
| G1864727 | LOC106612143 | other | downstream | 475384 | 40571892 ~ 40580884 (+) |
| nog3 | nog | other | downstream | 874905 | 40971413 ~ 40992948 (+) |
