G1867825 (yo84)



Basic Information


Item Value
gene id G1867825
gene name yo84
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 42759454 ~ 42759750 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2136986
tttccgaatgacatcaccaagaggtaaaatatatagtgaaaacaatagtggtcctaaaacggagccttgaggaacaccaaaatgtacagttgatttgtcagaggacaaaccatctacagagacaaactgatatcttttcgacagataagatctaaaccaggccagaacttgtcagtgtagaccaatttgggtttccaatctctccaaaataatgtgattatcgatggtatcaaagcagcactaaggtctaggagcatgaggacagatgcagagcctcggtctgacaccattaaaagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2136986 True 297 lncRNA 0.41 1 42759454 42759750

Neighbor


gene id symbol gene type direction distance location
gprc5c LOC106611907 coding downstream 9383 42731828 ~ 42750071 (-)
pde6gb cnrg coding downstream 100018 42654504 ~ 42659436 (-)
LOC110502791 nploc4 coding downstream 107588 42620672 ~ 42651866 (-)
rnf213b rnf213 coding downstream 140545 42545487 ~ 42618909 (-)
cep131 cep131 coding downstream 214206 42495792 ~ 42545248 (-)
gpr142 LOC106611900 coding upstream 13142 42772892 ~ 42790188 (-)
LOC110502797 LOC106611887 coding upstream 257801 43017551 ~ 43026440 (-)
LOC110502798 LOC106611875 coding upstream 271083 43030833 ~ 43046285 (-)
LOC118943900 NA coding upstream 429688 43189438 ~ 43204118 (-)
exoc7 exoc7 coding upstream 491551 43251301 ~ 43265188 (-)
G1867824 NA non-coding downstream 389 42758766 ~ 42759065 (-)
G1867778 NA non-coding downstream 35291 42723648 ~ 42724163 (-)
G1867777 NA non-coding downstream 38894 42717183 ~ 42720560 (-)
G1867814 NA non-coding downstream 42984 42716132 ~ 42716470 (-)
G1867831 NA non-coding upstream 7412 42767162 ~ 42767582 (-)
G1867833 NA non-coding upstream 8516 42768266 ~ 42768526 (-)
G1867835 NA non-coding upstream 10963 42770713 ~ 42770924 (-)
G1867964 NA non-coding upstream 133250 42893000 ~ 42897931 (-)
G1867932 NA non-coding upstream 149435 42909185 ~ 42910290 (-)
srsf2a LOC106612293 other downstream 2574242 40179809 ~ 40185223 (-)
G1864033 NA other downstream 3306039 39449397 ~ 39453415 (-)
G1862272 NA other downstream 4602245 38156749 ~ 38157209 (-)
G1861368 NA other downstream 5424040 37335027 ~ 37335414 (-)
G1860462 NA other downstream 6307995 36448831 ~ 36451459 (-)
G1868010 NA other upstream 155656 42915406 ~ 42978144 (-)
G1868940 LOC106611807 other upstream 727118 43486868 ~ 43501433 (-)
G1872165 NA other upstream 3268170 46027920 ~ 46029807 (-)
G1872556 NA other upstream 4037485 46797235 ~ 46797650 (-)
G1873030 NA other upstream 4181536 46941286 ~ 46942457 (-)

Expression



Co-expression Network