XLOC_037757


Basic Information

Item Value
gene id XLOC_037757
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 20802497 ~ 20805121 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075337
ttctgtagttacattgtgtatgaAGACAGACTAAAATGAAAGTTGCTATATTCTTGGCAGAATAGGATCTATACTCTAATTCCAGCATAATACTCATGGAACTTCAAGTGGTTTCTACTTCAGAGCTGGATGTTACTGAGGGTTAGGGTTGTGATAGGTGTTGGCATTAATAAAACTCTCAAGAACTTTGCTGCTTTTGACGAAATGGTGACAATTTTCAGGCACAGAAATGGCCCTGCCAGACCCATAGATcaattgaatgaattaaaaatggtAAGACTTTTGGGGACTTGTACAACGTGGCGAGTTCCTTTTAAGCATCAAGTTTCTTATTAAAGGGCTAAACCAACTATTCAATtcttcacacttagctgatgattgattataaagcttgcttggcatgctgtcctgggagagagccctgagctcataaaatccttgagcctggggctccctcctgttgcaaaGTGAGAGGGGAATtaaagctcaggtagatcttgagaattcccctgctgtagtagctaattgAACATATAGTAATTGCTcttaactacttactaggagcatgtctatggtgccgatttggattagtcaattaacttaagctgcatgtttttgtatGGTGggaggaacccaggggaaactcAACAAAGAAACATCAGCTATCTTGGTAATGACTAGAACCAAAaacattcttactgtgaggcaacagtgctaaccactgggccaccatggcacccatctaggaaaggaggagcagtaggggtggaaggagggattctttAAAACAAAGAAGACTGTGGTATGAAACCAAGGGTATTTATAGAGGCTTAGGAAtcttctgattggtgaatcataaattgaattatgtcgcaagcaatcataagcacctgATCCTCTAgaaattgtttataaataaaaaaaaaaattcaaattttcACAAATTGAAAGTTCTGTTATAGTTCACATTCTCCACAGAAGGCTTCTGAGTATGTTGAATACAATttgagatattttgaataatgtcggTAACATAAGCCATtgcgttgcattgttttgtttctttgttttgtccCTTTATAAGTATTTTCATGCTTGAAGTCAGTATTTATGAGCAGTGTTGACCATGTTCCTTTCAAAGAGTAATTAGTTTTAATTACTAGTTACTATTCACAAAAAGTAACttgagttacataattataaaagtaactaattaccagggaaagtaacttttgtgttactttaaaaaatctaatttgtcaaatgactacagaataaatataaaacattgtacactaatctGCTCTATTGTAATGTTGATGTAGGACAATGTGAGagacaccatcatcatcatcaaattcaacatatcataataaatattagaaaattgaaaaaaagtagtgcttatatttTCAGTTTGCAAAAGCTAGCTTGTTGGATTTGCCATTATTCTGACTCCTGGTCGTTGGTGTGTGCGACACTGTGTGTGAGCTTCTGTGTGAACACCCGCACTATTCTGCCTCTAATTGGCAAACGATGGAAATTTACTGAGCCAATCATCAGGTTCTCAATTACACCACGttcacagacacaccaatcatcatcagtgGTTGGTTATGTGTCCTACCCcagcctcaaacacacacacaccccagagGAAAAAAGGTTCCTATGACTGAGACAGACGCTGCTCGCATGAAAACCGCTTCAGTGTTCTTAATTATAGTAACACACATTTATTGTCAGATACGGCAATAGCGTTGTAACAGGGGAAACTGTAACTCATTTGATTACTCATTACTGAATAAAGTATTGCCGGTAGTAGCCCCACTTATTTAAATGCCGTTATTCCCATCACTGTTAATGAGAGGATGCAGATTTGGTACATTTGCAaggtgagctgcatgcaatgcttttaatgggCACCCTACcccgtcactagctccattgagtgcactgtgtctgacattgcaagtcTGAGACATGCAGTCCCCATCCAGATACTATTAGTATGAGCTTTGCGTATCAGCCCATACTAATTCTTCCCCCGGTCTTAGCAAATCTCACATTCTTCATGTCCATCCATAGATTGTCAGTCAGCCTGGTCAAACAGCTCGTTCTACTCTTGTGTcctgctgtttgtttttaatctTGTAAGCAGCGCTGGTGAAGCAGCAGTCCAGCAGAGTGCCAGTGTCTCTGAGGCGCCGCATGCAGTGAGCAAAATGAATCAGTGTTTTAGAGAGCTCTCACCATGGCGGAGGGGTCAGCAAAGCTGGACTCAACTGGAACACCTGGACAAGATTGCTTTGGCTTCAGACTATGAATCACACTGAGTATGACCACACCATCAGAAATCAGCAGGGGGATCTGGGAAATGGAGACatgatcatcatcttcatcaaatGGTGATAGTGAACACCCACCCATGACCGACACACACCTGCaacttctccacgatggac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075337 True 2465 lncRNA 0.40 2 20802497 20805121

Neighbor

gene id symbol gene type direction distance location
XLOC_037756 NA coding downstream 15844 20784043 ~ 20786653 (-)
XLOC_037755 NA coding downstream 19985 20764550 ~ 20782512 (-)
XLOC_037754 NA coding downstream 165487 20634737 ~ 20637010 (-)
XLOC_037753 igsf3 coding downstream 429520 20076556 ~ 20372977 (-)
XLOC_037752 BX957345.1 coding downstream 837725 19945634 ~ 19964772 (-)
XLOC_037758 gdap2 coding upstream 1213 20806334 ~ 20853467 (-)
XLOC_037759 tbx15 coding upstream 225809 21030930 ~ 21067971 (-)
XLOC_037760 wars2 coding upstream 267238 21072359 ~ 21098413 (-)
XLOC_037761 NA coding upstream 389485 21194606 ~ 21205554 (-)
XLOC_037762 pla1a coding upstream 417307 21222428 ~ 21231297 (-)
XLOC_037751 NA non-coding downstream 938188 19857353 ~ 19864309 (-)
XLOC_037767 CR392366.1 non-coding upstream 627424 21432545 ~ 21432661 (-)
XLOC_037770 NA non-coding upstream 1011079 21816200 ~ 21817737 (-)
XLOC_037801 NA non-coding upstream 1813335 22618456 ~ 22626761 (-)
XLOC_037813 CR392363.2 non-coding upstream 2578293 23383414 ~ 23388075 (-)

Expression


Co-expression Network