G1868905


Basic Information

Item Value
gene id G1868905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 43438773 ~ 43440952 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2138149
CTTTAATTCACTAAGTACATTTGTAATAATGTAAAACAGATAtttgacattctgtactgtctccTCACATGAAACATTTGaactcaaatccaaaatgctggagtatagaaacaaatgaaacattttattttcactgtccaaatacataagGAGGAAAGTGTACGTATATATGCAGTGAGTGAGTTATGTGGACATATATCACACATTTGTAATAAAGTTATATGTTAGGTGTCACAAACATTATATTGAATGGACCAAGGGACAGCGTGCGTAGCGTTCCACTTGTTTAATTTAAGAAACTCACCAAAACAGTACAGAAGAAAGGAACGTGACGCTATGGCGTGCTCACAAGCAACAatacataaacaagatcccacaaaaacccagtgggaaaaggctgcctaaatatgatccccaatcagagacaacgatagacagctgcctctgattgggatcaataccaggccaacatagaaattaaaaaactagactacccaccctagttacaccctgacctaaccaaaatagagaataaaaaggatctctaaggtcagagcgtgacattAGGTTCATAACCTAAAACAACTATTGTATTGTTAATGTGTTTATGGGGCTTGTAATTAATGGTGTGAACAAGGGTGACAAAGTAAGATGAAGATTCAGTCACAGATAATATTTCTTGCCAATAGAGAAGGAATGTATCTTTCAACAGCTGCAATTCAACACTGTCTCCTTTTATGGACAGAAATTTGTTGAAAAACTCAAGACTCTCATCAGGCACTAATAACACTGAAGGATTTCAAAAACATAGGCTACATGTTTTGCCATTAACTGACTAACCTCGTCCACGGGCTAATTGCTACCACATAAGTATGGGTTCAACAGAAAGAGAGCCGACTGGTGGACGAGACCATCAACTGACTGACTCCTACAAACCCACATTAATCATCAGTCGCCAACAGGCCTTCCAGCGTAATTGGAGGTATGAAGTATTCCATTCATCCAGATTACTAATTTGAAAGGCAAGTCTAACCTTAATTACGTTTACATGACCATTGGGTAAAAGATCTGAAGCCTTGTGGTTTAAGGTTGAGCCCTGATCAAGAGAGATTCCAGAGGCATGACTAGGTCGAGGCTCCtgggtggtgtggttgtgtgggCGGTGAGGGATGCATGTTGTATAGGGGGATAACCATAAAACAAGCTGTCACTGGTGAGTCACTGGAAGGAGATCTTCACAGATTTGCTACAGTATATTTTCAAGGTTGGAAGTTGGACCATTTTGGAAAAACCTTGGATTGTGAGTAATATAAAAATGCTTTATTGTCGCCCTGTTTGCAAAGACATAgaataaaaatgaaatattatGTTTAAACGTCAGGAGTTAAAATACTTATATTCCTATATGTACAATTATACAACATGATATACATCATATTACGAGTCTAAGGCGGTAATTTCTGTGGGTACATGGACCCTGACGCAAGGGAGGATAGGACTATTCTCTTCTATCCACTTGTAGTACTTGGTCACTGTTGTGTACAGGTCTGGTCGTAATGCTCTAGAACACCCCTCGCCCCAACTGACGATTCCAAAGAGGAACATCCAATTGTCCACTTCACACACCATGGGCCCTCTCGAATCACCCTGgcacgcacgcatctTGACTCCAGTCCGGTTTTCCAGCACATAACATGTTTTCTGTGCTCATGTTTCCTTAGTACTCATGGGCCAAAACATTCACCTTTGCCTCCTGGTACTGTGAATTGTACCATAAACCTTAATGAAGAGAGGACACACATGCTGTATAACAAAGCACTCAACAGGTAAGGAAAAGTATAAATATTGCATTGGCATGAAAACTAGTGAAATTATCATTGGAAGGGAATGGGAATAGATATCAAGTGATTGTTTGATACATTTAGAGGTCTGGGTCGTATTTAAAAAGTGTCTCAGACTCAGTTGCCTTTTAGATTATAATAAATGGACAGGAAGGACC

Function

NR:

description
PREDICTED: urokinase-type plasminogen activator

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2138149 True 1999 lncRNA 0.40 2 43438773 43440952

Neighbor

gene id symbol gene type direction distance location
LOC110502805 LOC106611817 coding downstream 5034 43408822 ~ 43433739 (-)
LOC110502803 LOC106611846 coding downstream 48282 43358726 ~ 43390491 (-)
LOC110502802 LOC106611860 coding downstream 82530 43313733 ~ 43356243 (-)
LOC110502801 LOC106611867 coding downstream 135655 43277974 ~ 43303118 (-)
LOC110503118 NA coding downstream 168213 43266226 ~ 43270560 (-)
dusp29 LOC106611804 coding upstream 433025 43873977 ~ 43875881 (-)
LOC110502811 dusp13 coding upstream 436726 43877678 ~ 43902553 (-)
LOC110502816 LOC106611732 coding upstream 567181 44008133 ~ 44010949 (-)
LOC100301649 LOC106611671 coding upstream 859106 44300058 ~ 44508529 (-)
LOC110503120 LOC106611651 coding upstream 1081026 44521978 ~ 44646297 (-)
G1868842 NA non-coding downstream 108687 43329286 ~ 43330086 (-)
G1868823 NA non-coding downstream 149286 43289183 ~ 43289487 (-)
G1868810 NA non-coding downstream 162082 43274964 ~ 43276691 (-)
G1868353 NA non-coding downstream 227147 43211406 ~ 43211626 (-)
G1868307 NA non-coding downstream 272665 43165901 ~ 43166108 (-)
G1868926 NA non-coding upstream 25024 43465976 ~ 43527171 (-)
G1869102 NA non-coding upstream 278887 43719839 ~ 43765207 (-)
G1869111 NA non-coding upstream 294590 43735542 ~ 43798670 (-)
G1869194 kat6b non-coding upstream 409164 43850116 ~ 43862471 (-)
G1869236 LOC106611746 non-coding upstream 486398 43927350 ~ 43930401 (-)
G1868010 NA other downstream 460629 42915406 ~ 42978144 (-)
srsf2a LOC106612293 other downstream 3253561 40179809 ~ 40185223 (-)
G1864033 NA other downstream 3985358 39449397 ~ 39453415 (-)
G1862272 NA other downstream 5281564 38156749 ~ 38157209 (-)
G1861368 NA other downstream 6103359 37335027 ~ 37335414 (-)
G1868940 LOC106611807 other upstream 45916 43486868 ~ 43501433 (-)
G1872165 NA other upstream 2586968 46027920 ~ 46029807 (-)
G1872556 NA other upstream 3356283 46797235 ~ 46797650 (-)
G1873030 NA other upstream 3500334 46941286 ~ 46942457 (-)
G1873043 NA other upstream 3519670 46960622 ~ 46961653 (-)

Expression


Co-expression Network