G1868926


Basic Information

Item Value
gene id G1868926
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 43465976 ~ 43527171 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2138170
TTCAGATGGTTTTGTAGGGTCTCAGTAACTTCATCTACACATTCAAACTGCGCTGGTCTTATtcagacacacaaaaaaaaaaattttaaaaacgTCCAACCGTTTGTACCAGCTGTGTTAGCAACTGTAACGGTTAGTTTAGTGTAGTTCAAAgatagaagaggaagagaaggctGATATTTCAACACCAGTTTCATGTGATGCATTGAACTTAAACACACTTAAACACACTCTCTTCCGTGAGACTACCTGGACATAGTGTCAGCTTAGTCAAGTACTCGGCTTAATTACAGTAATCAGAAGCTAGCCCAAAAACTGTCCACACCGTCTTTATCCCCCATACCCAAACCTAATCTTCAAAGTATTTGACTGATCATTCATTAATGTTTCACAAAATTGGCTGTGCAGCGCACACCACGTTATGTCAAGACACAGTttaaacattacagtacagttgGCCTCTAGTCAGGCTAAAACACGGAGACTGGCTTGCTATAGTTTCTCTGAGAAGTACAAAGTATAGAGGGCCAGACCAGAAGGAGACCTAAGGTCTACATGTAATCTCAACGCAACATGGTGAAAAATCAAGCTAGTCCAGAAACTGACATAGTTGAATACATGTCATCTTAATGGATATTGAATTTCAATCGTCAACTCTTTTGTACGCTAAATGGTTGTAAACATTATAAGTTAATAAGACATTCTCTATGCAATtaatgtctcttatcgatggcggttatgatatcgtttaggaccttgagcggggctgaggtgcacccatgaccagctctgaaaccagattgcataccggaggaggtatggtgggattcgaaatggtcggtaatctgtttgttaacttggctttcgaagaccttagaaaggcagggtaggatagatataggtctgttgcagtttgggtctagagtatctCCCCCTTTTGAAGAGTGGGATAattgcggcagctttccaatctttgggaatctcagacggtatgaaagagaggttgaacaggatagtaataggggttgcaacaattttggcagatcattttagaaagagagggtccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2138170 True 1068 lncRNA 0.41 2 43465976 43527171

Neighbor

gene id symbol gene type direction distance location
LOC110502805 LOC106611817 coding downstream 32237 43408822 ~ 43433739 (-)
LOC110502803 LOC106611846 coding downstream 75485 43358726 ~ 43390491 (-)
LOC110502802 LOC106611860 coding downstream 109733 43313733 ~ 43356243 (-)
LOC110502801 LOC106611867 coding downstream 162858 43277974 ~ 43303118 (-)
LOC110503118 NA coding downstream 195416 43266226 ~ 43270560 (-)
dusp29 LOC106611804 coding upstream 346806 43873977 ~ 43875881 (-)
LOC110502811 dusp13 coding upstream 350507 43877678 ~ 43902553 (-)
LOC110502816 LOC106611732 coding upstream 480962 44008133 ~ 44010949 (-)
LOC100301649 LOC106611671 coding upstream 772887 44300058 ~ 44508529 (-)
LOC110503120 LOC106611651 coding upstream 994807 44521978 ~ 44646297 (-)
G1868905 NA non-coding downstream 25024 43438773 ~ 43440952 (-)
G1868842 NA non-coding downstream 135890 43329286 ~ 43330086 (-)
G1868823 NA non-coding downstream 176489 43289183 ~ 43289487 (-)
G1868810 NA non-coding downstream 189285 43274964 ~ 43276691 (-)
G1868353 NA non-coding downstream 254350 43211406 ~ 43211626 (-)
G1869102 NA non-coding upstream 192668 43719839 ~ 43765207 (-)
G1869111 NA non-coding upstream 208371 43735542 ~ 43798670 (-)
G1869194 kat6b non-coding upstream 322945 43850116 ~ 43862471 (-)
G1869236 LOC106611746 non-coding upstream 400179 43927350 ~ 43930401 (-)
G1869210 NA non-coding upstream 406452 43933623 ~ 43953290 (-)
G1868010 NA other downstream 487832 42915406 ~ 42978144 (-)
srsf2a LOC106612293 other downstream 3280764 40179809 ~ 40185223 (-)
G1864033 NA other downstream 4012561 39449397 ~ 39453415 (-)
G1862272 NA other downstream 5308767 38156749 ~ 38157209 (-)
G1861368 NA other downstream 6130562 37335027 ~ 37335414 (-)
G1872165 NA other upstream 2500749 46027920 ~ 46029807 (-)
G1872556 NA other upstream 3270064 46797235 ~ 46797650 (-)
G1873030 NA other upstream 3414115 46941286 ~ 46942457 (-)
G1873043 NA other upstream 3433451 46960622 ~ 46961653 (-)
LOC110502870 PHF5A other upstream 3540737 47067897 ~ 47079813 (-)

Expression


Co-expression Network