Gene
RNA
| Item | Value |
|---|---|
| gene id | G1868940 |
| gene name | LOC106611807 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 43486868 ~ 43501433 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: vinculin-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2138185 | True | 341 | TUCP | 0.54 | 3 | 43486868 | 43501433 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502805 | LOC106611817 | coding | downstream | 53129 | 43408822 ~ 43433739 (-) |
| LOC110502803 | LOC106611846 | coding | downstream | 96377 | 43358726 ~ 43390491 (-) |
| LOC110502802 | LOC106611860 | coding | downstream | 130625 | 43313733 ~ 43356243 (-) |
| LOC110502801 | LOC106611867 | coding | downstream | 183750 | 43277974 ~ 43303118 (-) |
| LOC110503118 | NA | coding | downstream | 216308 | 43266226 ~ 43270560 (-) |
| dusp29 | LOC106611804 | coding | upstream | 372544 | 43873977 ~ 43875881 (-) |
| LOC110502811 | dusp13 | coding | upstream | 376245 | 43877678 ~ 43902553 (-) |
| LOC110502816 | LOC106611732 | coding | upstream | 506700 | 44008133 ~ 44010949 (-) |
| LOC100301649 | LOC106611671 | coding | upstream | 798625 | 44300058 ~ 44508529 (-) |
| LOC110503120 | LOC106611651 | coding | upstream | 1020545 | 44521978 ~ 44646297 (-) |
| G1868905 | NA | non-coding | downstream | 45916 | 43438773 ~ 43440952 (-) |
| G1868842 | NA | non-coding | downstream | 156782 | 43329286 ~ 43330086 (-) |
| G1868823 | NA | non-coding | downstream | 197381 | 43289183 ~ 43289487 (-) |
| G1868810 | NA | non-coding | downstream | 210177 | 43274964 ~ 43276691 (-) |
| G1868353 | NA | non-coding | downstream | 275242 | 43211406 ~ 43211626 (-) |
| G1869102 | NA | non-coding | upstream | 218406 | 43719839 ~ 43765207 (-) |
| G1869111 | NA | non-coding | upstream | 234109 | 43735542 ~ 43798670 (-) |
| G1869194 | kat6b | non-coding | upstream | 348683 | 43850116 ~ 43862471 (-) |
| G1869236 | LOC106611746 | non-coding | upstream | 425917 | 43927350 ~ 43930401 (-) |
| G1869210 | NA | non-coding | upstream | 432190 | 43933623 ~ 43953290 (-) |
| G1868010 | NA | other | downstream | 508724 | 42915406 ~ 42978144 (-) |
| srsf2a | LOC106612293 | other | downstream | 3301656 | 40179809 ~ 40185223 (-) |
| G1864033 | NA | other | downstream | 4033453 | 39449397 ~ 39453415 (-) |
| G1862272 | NA | other | downstream | 5329659 | 38156749 ~ 38157209 (-) |
| G1861368 | NA | other | downstream | 6151454 | 37335027 ~ 37335414 (-) |
| G1872165 | NA | other | upstream | 2526487 | 46027920 ~ 46029807 (-) |
| G1872556 | NA | other | upstream | 3295802 | 46797235 ~ 46797650 (-) |
| G1873030 | NA | other | upstream | 3439853 | 46941286 ~ 46942457 (-) |
| G1873043 | NA | other | upstream | 3459189 | 46960622 ~ 46961653 (-) |
| LOC110502870 | PHF5A | other | upstream | 3566475 | 47067897 ~ 47079813 (-) |
