Gene
RNA
| Item | Value |
|---|---|
| gene id | G1869387 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 44068115 ~ 44068343 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/arginine repetitive matrix protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2138670 | True | 229 | lncRNA | 0.64 | 1 | 44068115 | 44068343 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502816 | LOC106611732 | coding | downstream | 57166 | 44008133 ~ 44010949 (-) |
| LOC110502811 | dusp13 | coding | downstream | 165562 | 43877678 ~ 43902553 (-) |
| dusp29 | LOC106611804 | coding | downstream | 192234 | 43873977 ~ 43875881 (-) |
| LOC110502805 | LOC106611817 | coding | downstream | 634376 | 43408822 ~ 43433739 (-) |
| LOC110502803 | LOC106611846 | coding | downstream | 677624 | 43358726 ~ 43390491 (-) |
| LOC100301649 | LOC106611671 | coding | upstream | 231715 | 44300058 ~ 44508529 (-) |
| LOC110503120 | LOC106611651 | coding | upstream | 453635 | 44521978 ~ 44646297 (-) |
| LOC110502821 | LOC106611643 | coding | upstream | 588615 | 44656958 ~ 44687275 (-) |
| LOC110502822 | LOC106611598 | coding | upstream | 625732 | 44694075 ~ 44736553 (-) |
| snx5 | LOC106611592 | coding | upstream | 690192 | 44758535 ~ 44773318 (-) |
| G1869368 | NA | non-coding | downstream | 17858 | 44049947 ~ 44050257 (-) |
| G1869287 | NA | non-coding | downstream | 79697 | 43988120 ~ 43988418 (-) |
| G1869278 | NA | non-coding | downstream | 86224 | 43981686 ~ 43981891 (-) |
| G1869266 | NA | non-coding | downstream | 93361 | 43974546 ~ 43974754 (-) |
| G1869210 | NA | non-coding | downstream | 114825 | 43933623 ~ 43953290 (-) |
| G1869392 | NA | non-coding | upstream | 2439 | 44070782 ~ 44070996 (-) |
| G1871327 | NA | non-coding | upstream | 361460 | 44429803 ~ 44444575 (-) |
| G1871377 | NA | non-coding | upstream | 445179 | 44513522 ~ 44513759 (-) |
| G1871378 | NA | non-coding | upstream | 445492 | 44513835 ~ 44514289 (-) |
| G1871379 | NA | non-coding | upstream | 446274 | 44514617 ~ 44514816 (-) |
| G1868940 | LOC106611807 | other | downstream | 566682 | 43486868 ~ 43501433 (-) |
| G1868010 | NA | other | downstream | 1089971 | 42915406 ~ 42978144 (-) |
| srsf2a | LOC106612293 | other | downstream | 3882903 | 40179809 ~ 40185223 (-) |
| G1864033 | NA | other | downstream | 4614700 | 39449397 ~ 39453415 (-) |
| G1862272 | NA | other | downstream | 5910906 | 38156749 ~ 38157209 (-) |
| G1872165 | NA | other | upstream | 1959577 | 46027920 ~ 46029807 (-) |
| G1872556 | NA | other | upstream | 2728892 | 46797235 ~ 46797650 (-) |
| G1873030 | NA | other | upstream | 2872943 | 46941286 ~ 46942457 (-) |
| G1873043 | NA | other | upstream | 2892279 | 46960622 ~ 46961653 (-) |
| LOC110502870 | PHF5A | other | upstream | 2999565 | 47067897 ~ 47079813 (-) |
