Gene
RNA
| Item | Value |
|---|---|
| gene id | G1871399 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 44559623 ~ 44564516 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2140910 | False | 238 | lncRNA | 0.58 | 2 | 44559623 | 44564516 |
| TU2140913 | True | 238 | lncRNA | 0.58 | 2 | 44559623 | 44564516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100301649 | LOC106611671 | coding | downstream | 51094 | 44300058 ~ 44508529 (-) |
| LOC110502816 | LOC106611732 | coding | downstream | 548674 | 44008133 ~ 44010949 (-) |
| LOC110502811 | dusp13 | coding | downstream | 657070 | 43877678 ~ 43902553 (-) |
| dusp29 | LOC106611804 | coding | downstream | 683742 | 43873977 ~ 43875881 (-) |
| LOC110502805 | LOC106611817 | coding | downstream | 1125884 | 43408822 ~ 43433739 (-) |
| LOC110502821 | LOC106611643 | coding | upstream | 92442 | 44656958 ~ 44687275 (-) |
| LOC110502822 | LOC106611598 | coding | upstream | 129559 | 44694075 ~ 44736553 (-) |
| snx5 | LOC106611592 | coding | upstream | 194019 | 44758535 ~ 44773318 (-) |
| si:dkey-76k16.6 | LOC106613470 | coding | upstream | 213388 | 44777904 ~ 44789403 (-) |
| LOC100136752 | LOC100136752 | coding | upstream | 234271 | 44798787 ~ 44801437 (-) |
| G1871394 | NA | non-coding | downstream | 7619 | 44549880 ~ 44552004 (-) |
| G1871390 | NA | non-coding | downstream | 18048 | 44541117 ~ 44541575 (-) |
| LOC110503120 | LOC106611651 | non-coding | downstream | 37213 | 44521978 ~ 44646297 (-) |
| G1871381 | NA | non-coding | downstream | 42156 | 44517228 ~ 44517467 (-) |
| G1871379 | NA | non-coding | downstream | 44807 | 44514617 ~ 44514816 (-) |
| G1871408 | NA | non-coding | upstream | 21536 | 44586052 ~ 44586638 (-) |
| G1871366 | NA | non-coding | upstream | 57301 | 44621817 ~ 44626347 (-) |
| G1871471 | NA | non-coding | upstream | 90555 | 44655071 ~ 44655308 (-) |
| G1871490 | NA | non-coding | upstream | 178165 | 44742681 ~ 44742896 (-) |
| G1871497 | NA | non-coding | upstream | 188207 | 44752723 ~ 44752975 (-) |
| G1868940 | LOC106611807 | other | downstream | 1058190 | 43486868 ~ 43501433 (-) |
| G1868010 | NA | other | downstream | 1581479 | 42915406 ~ 42978144 (-) |
| srsf2a | LOC106612293 | other | downstream | 4374411 | 40179809 ~ 40185223 (-) |
| G1864033 | NA | other | downstream | 5106208 | 39449397 ~ 39453415 (-) |
| G1862272 | NA | other | downstream | 6402414 | 38156749 ~ 38157209 (-) |
| G1872165 | NA | other | upstream | 1463404 | 46027920 ~ 46029807 (-) |
| G1872556 | NA | other | upstream | 2232719 | 46797235 ~ 46797650 (-) |
| G1873030 | NA | other | upstream | 2376770 | 46941286 ~ 46942457 (-) |
| G1873043 | NA | other | upstream | 2396106 | 46960622 ~ 46961653 (-) |
| LOC110502870 | PHF5A | other | upstream | 2503392 | 47067897 ~ 47079813 (-) |
