G1872363



Basic Information


Item Value
gene id G1872363
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 46466041 ~ 46466324 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2142007
gctatcctcagttattaggtctgagtagtcaagtacgtctaatactagtctgacattgttagaaatatgtctgttcctcatgaagccagactgtgtttcatcaatgattgcatccaggacttctttaattatttttgcaagtagtGAGGCTAATATCTTACagtcattattaagaagacaaattggacgccagttatcgatgagcagcacttcttttttaggcttaggtatcagtgttattaacccctgactcattgtaggagggagaacattgtttttaatac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2142007 True 284 lncRNA 0.37 1 46466041 46466324

Neighbor


gene id symbol gene type direction distance location
mettl9 mettl9 coding downstream 2590 46459902 ~ 46463451 (-)
LOC110502849 LOC106609135 coding downstream 6450 46448825 ~ 46459591 (-)
LOC110502842 LOC106609110 coding downstream 24091 46436849 ~ 46441950 (-)
LOC110502843 LOC106609120 coding downstream 29293 46425302 ~ 46436748 (-)
LOC110502839 LOC106609079 coding downstream 41003 46369425 ~ 46425038 (-)
LOC110502844 LOC106609046 coding upstream 52287 46518611 ~ 46531928 (-)
LOC110503125 polr3e coding upstream 141850 46608174 ~ 46631592 (-)
trnal-aag-68 NA coding upstream 165449 46631773 ~ 46631854 (-)
LOC110502851 eef2k coding upstream 182997 46649321 ~ 46674372 (-)
tha1 LOC106608997 coding upstream 219315 46685639 ~ 46688357 (-)
G1872362 NA non-coding downstream 295 46465359 ~ 46465746 (-)
G1872361 NA non-coding downstream 1060 46464683 ~ 46464981 (-)
G1872360 NA non-coding downstream 1365 46464398 ~ 46464676 (-)
G1872273 NA non-coding downstream 204104 46261662 ~ 46261937 (-)
G1872188 LOC106599751 non-coding downstream 270892 46180463 ~ 46195149 (-)
G1872365 NA non-coding upstream 1387 46467711 ~ 46468332 (-)
G1872366 NA non-coding upstream 2200 46468524 ~ 46468926 (-)
G1872373 NA non-coding upstream 10314 46476638 ~ 46476855 (-)
G1872378 NA non-coding upstream 18711 46485035 ~ 46485256 (-)
G1872384 NA non-coding upstream 33286 46499610 ~ 46499930 (-)
G1872165 NA other downstream 436234 46027920 ~ 46029807 (-)
G1868940 LOC106611807 other downstream 2964608 43486868 ~ 43501433 (-)
G1868010 NA other downstream 3487897 42915406 ~ 42978144 (-)
srsf2a LOC106612293 other downstream 6280829 40179809 ~ 40185223 (-)
G1864033 NA other downstream 7012626 39449397 ~ 39453415 (-)
G1872556 NA other upstream 330911 46797235 ~ 46797650 (-)
G1873030 NA other upstream 474962 46941286 ~ 46942457 (-)
G1873043 NA other upstream 494298 46960622 ~ 46961653 (-)
LOC110502870 PHF5A other upstream 601584 47067897 ~ 47079813 (-)
G1873183 NA other upstream 791269 47257593 ~ 47312395 (-)

Expression



Co-expression Network