G1872365


Basic Information

Item Value
gene id G1872365
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 46467711 ~ 46468332 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2142009
cacatgagggaacacaagcatacatagattacaaacaatagacaatcgagctagggggtacaatatcacattacaattacacaaggaccttaagggacatgcatatacttacaattctaacagcttttttgttagtagagcatttaactgtcttaaaatacagttcaatttatttttgtagggtacaaaaatgtggttttctgtttgtaaatttacatttgtgtatatgaaatttggccaaaagaataatgaaattaattacataaaaatgattccgcttatttctattgtatgtaaagaatccaaacagtacatctctccacaatagtgtaaaatcttcataaatgtgttcaattataaacctactgatgtcttgccacagttttcttacatgcatacaatgccaaaaaagatgcacaactgtttctgggtggtcattacaaaaggagcaatttgagttgatgttttccttaaacttcttcatatagtggttggcaggataatatttatgaataattttaaaggaaacttccttaattttgttaacaagtaggtatgtgtgtggcaacatccaaacttttttccaacagatattatcaataaatccattccaataaggcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2142009 True 622 lncRNA 0.31 1 46467711 46468332

Neighbor

gene id symbol gene type direction distance location
mettl9 mettl9 coding downstream 4260 46459902 ~ 46463451 (-)
LOC110502849 LOC106609135 coding downstream 8120 46448825 ~ 46459591 (-)
LOC110502842 LOC106609110 coding downstream 25761 46436849 ~ 46441950 (-)
LOC110502843 LOC106609120 coding downstream 30963 46425302 ~ 46436748 (-)
LOC110502839 LOC106609079 coding downstream 42673 46369425 ~ 46425038 (-)
LOC110502844 LOC106609046 coding upstream 50279 46518611 ~ 46531928 (-)
LOC110503125 polr3e coding upstream 139842 46608174 ~ 46631592 (-)
trnal-aag-68 NA coding upstream 163441 46631773 ~ 46631854 (-)
LOC110502851 eef2k coding upstream 180989 46649321 ~ 46674372 (-)
tha1 LOC106608997 coding upstream 217307 46685639 ~ 46688357 (-)
G1872363 NA non-coding downstream 1387 46466041 ~ 46466324 (-)
G1872362 NA non-coding downstream 1965 46465359 ~ 46465746 (-)
G1872361 NA non-coding downstream 2730 46464683 ~ 46464981 (-)
G1872360 NA non-coding downstream 3035 46464398 ~ 46464676 (-)
G1872273 NA non-coding downstream 205774 46261662 ~ 46261937 (-)
G1872366 NA non-coding upstream 192 46468524 ~ 46468926 (-)
G1872373 NA non-coding upstream 8306 46476638 ~ 46476855 (-)
G1872378 NA non-coding upstream 16703 46485035 ~ 46485256 (-)
G1872384 NA non-coding upstream 31278 46499610 ~ 46499930 (-)
G1872388 NA non-coding upstream 34341 46502673 ~ 46502882 (-)
G1872165 NA other downstream 437904 46027920 ~ 46029807 (-)
G1868940 LOC106611807 other downstream 2966278 43486868 ~ 43501433 (-)
G1868010 NA other downstream 3489567 42915406 ~ 42978144 (-)
srsf2a LOC106612293 other downstream 6282499 40179809 ~ 40185223 (-)
G1864033 NA other downstream 7014296 39449397 ~ 39453415 (-)
G1872556 NA other upstream 328903 46797235 ~ 46797650 (-)
G1873030 NA other upstream 472954 46941286 ~ 46942457 (-)
G1873043 NA other upstream 492290 46960622 ~ 46961653 (-)
LOC110502870 PHF5A other upstream 599576 47067897 ~ 47079813 (-)
G1873183 NA other upstream 789261 47257593 ~ 47312395 (-)

Expression


Co-expression Network