Gene
RNA
| Item | Value |
|---|---|
| gene id | G1872366 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 46468524 ~ 46468926 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| adaptin ear-binding coat-associated protein 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2142010 | True | 403 | lncRNA | 0.41 | 1 | 46468524 | 46468926 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mettl9 | mettl9 | coding | downstream | 5073 | 46459902 ~ 46463451 (-) |
| LOC110502849 | LOC106609135 | coding | downstream | 8933 | 46448825 ~ 46459591 (-) |
| LOC110502842 | LOC106609110 | coding | downstream | 26574 | 46436849 ~ 46441950 (-) |
| LOC110502843 | LOC106609120 | coding | downstream | 31776 | 46425302 ~ 46436748 (-) |
| LOC110502839 | LOC106609079 | coding | downstream | 43486 | 46369425 ~ 46425038 (-) |
| LOC110502844 | LOC106609046 | coding | upstream | 49685 | 46518611 ~ 46531928 (-) |
| LOC110503125 | polr3e | coding | upstream | 139248 | 46608174 ~ 46631592 (-) |
| trnal-aag-68 | NA | coding | upstream | 162847 | 46631773 ~ 46631854 (-) |
| LOC110502851 | eef2k | coding | upstream | 180395 | 46649321 ~ 46674372 (-) |
| tha1 | LOC106608997 | coding | upstream | 216713 | 46685639 ~ 46688357 (-) |
| G1872365 | NA | non-coding | downstream | 192 | 46467711 ~ 46468332 (-) |
| G1872363 | NA | non-coding | downstream | 2200 | 46466041 ~ 46466324 (-) |
| G1872362 | NA | non-coding | downstream | 2778 | 46465359 ~ 46465746 (-) |
| G1872361 | NA | non-coding | downstream | 3543 | 46464683 ~ 46464981 (-) |
| G1872360 | NA | non-coding | downstream | 3848 | 46464398 ~ 46464676 (-) |
| G1872373 | NA | non-coding | upstream | 7712 | 46476638 ~ 46476855 (-) |
| G1872378 | NA | non-coding | upstream | 16109 | 46485035 ~ 46485256 (-) |
| G1872384 | NA | non-coding | upstream | 30684 | 46499610 ~ 46499930 (-) |
| G1872388 | NA | non-coding | upstream | 33747 | 46502673 ~ 46502882 (-) |
| G1872389 | NA | non-coding | upstream | 34346 | 46503272 ~ 46503580 (-) |
| G1872165 | NA | other | downstream | 438717 | 46027920 ~ 46029807 (-) |
| G1868940 | LOC106611807 | other | downstream | 2967091 | 43486868 ~ 43501433 (-) |
| G1868010 | NA | other | downstream | 3490380 | 42915406 ~ 42978144 (-) |
| srsf2a | LOC106612293 | other | downstream | 6283312 | 40179809 ~ 40185223 (-) |
| G1864033 | NA | other | downstream | 7015109 | 39449397 ~ 39453415 (-) |
| G1872556 | NA | other | upstream | 328309 | 46797235 ~ 46797650 (-) |
| G1873030 | NA | other | upstream | 472360 | 46941286 ~ 46942457 (-) |
| G1873043 | NA | other | upstream | 491696 | 46960622 ~ 46961653 (-) |
| LOC110502870 | PHF5A | other | upstream | 598982 | 47067897 ~ 47079813 (-) |
| G1873183 | NA | other | upstream | 788667 | 47257593 ~ 47312395 (-) |
