Gene
RNA
| Item | Value |
|---|---|
| gene id | G1872439 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 46602483 ~ 46602988 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein NLRC3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2142114 | True | 332 | lncRNA | 0.42 | 2 | 46602483 | 46602988 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502844 | LOC106609046 | coding | downstream | 70555 | 46518611 ~ 46531928 (-) |
| mettl9 | mettl9 | coding | downstream | 139032 | 46459902 ~ 46463451 (-) |
| LOC110502849 | LOC106609135 | coding | downstream | 142892 | 46448825 ~ 46459591 (-) |
| LOC110502842 | LOC106609110 | coding | downstream | 160533 | 46436849 ~ 46441950 (-) |
| LOC110502843 | LOC106609120 | coding | downstream | 165735 | 46425302 ~ 46436748 (-) |
| LOC110503125 | polr3e | coding | upstream | 5186 | 46608174 ~ 46631592 (-) |
| trnal-aag-68 | NA | coding | upstream | 28785 | 46631773 ~ 46631854 (-) |
| LOC110502851 | eef2k | coding | upstream | 46333 | 46649321 ~ 46674372 (-) |
| tha1 | LOC106608997 | coding | upstream | 82651 | 46685639 ~ 46688357 (-) |
| LOC110502855 | LOC106608961 | coding | upstream | 272875 | 46875863 ~ 46882508 (-) |
| G1872432 | LOC106609027 | non-coding | downstream | 10418 | 46590583 ~ 46592065 (-) |
| G1872390 | NA | non-coding | downstream | 98611 | 46503600 ~ 46503872 (-) |
| G1872389 | NA | non-coding | downstream | 98903 | 46503272 ~ 46503580 (-) |
| G1872388 | NA | non-coding | downstream | 99601 | 46502673 ~ 46502882 (-) |
| G1872384 | NA | non-coding | downstream | 102553 | 46499610 ~ 46499930 (-) |
| G1872445 | NA | non-coding | upstream | 7298 | 46610286 ~ 46610909 (-) |
| G1872524 | LOC106608977 | non-coding | upstream | 139696 | 46742684 ~ 46746407 (-) |
| G1872550 | NA | non-coding | upstream | 185501 | 46788489 ~ 46788895 (-) |
| G1872555 | NA | non-coding | upstream | 193882 | 46796870 ~ 46797194 (-) |
| G1872558 | NA | non-coding | upstream | 198584 | 46801572 ~ 46801785 (-) |
| G1872165 | NA | other | downstream | 572676 | 46027920 ~ 46029807 (-) |
| G1868940 | LOC106611807 | other | downstream | 3101050 | 43486868 ~ 43501433 (-) |
| G1868010 | NA | other | downstream | 3624339 | 42915406 ~ 42978144 (-) |
| srsf2a | LOC106612293 | other | downstream | 6417271 | 40179809 ~ 40185223 (-) |
| G1864033 | NA | other | downstream | 7149068 | 39449397 ~ 39453415 (-) |
| G1872556 | NA | other | upstream | 194247 | 46797235 ~ 46797650 (-) |
| G1873030 | NA | other | upstream | 338298 | 46941286 ~ 46942457 (-) |
| G1873043 | NA | other | upstream | 357634 | 46960622 ~ 46961653 (-) |
| LOC110502870 | PHF5A | other | upstream | 464920 | 47067897 ~ 47079813 (-) |
| G1873183 | NA | other | upstream | 654605 | 47257593 ~ 47312395 (-) |
