G1872445


Basic Information

Item Value
gene id G1872445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 46610286 ~ 46610909 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2142120
gtctctgattaatgccctccttgcctggtccgtgagtttaggtgggcggccctctcttggcaggtttgttgtggtgccatattctttccatgttttaataatggatttaatggtgctccgtgggatgtttaaAAGTTTCtggtatttttttataacccaaccctgatctgtactctctacaactttgtccctgacctgtttggagagctccttggtcttcatggtgtcgcttgcttagttgtgttgcagactctggggccctgtcagaacaggttgtaatgcaacggAATGGGCTCCCgcgtggcgcagtggtctaagacactgcatcccagtgcaagaggcagtacctggttcaaatccaggcggc

Function

NR:

description
PREDICTED: high mobility group protein B2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2142120 True 367 lncRNA 0.50 2 46610286 46610909

Neighbor

gene id symbol gene type direction distance location
LOC110502844 LOC106609046 coding downstream 78358 46518611 ~ 46531928 (-)
mettl9 mettl9 coding downstream 146835 46459902 ~ 46463451 (-)
LOC110502849 LOC106609135 coding downstream 150695 46448825 ~ 46459591 (-)
LOC110502842 LOC106609110 coding downstream 168336 46436849 ~ 46441950 (-)
LOC110502843 LOC106609120 coding downstream 173538 46425302 ~ 46436748 (-)
trnal-aag-68 NA coding upstream 20864 46631773 ~ 46631854 (-)
LOC110502851 eef2k coding upstream 38412 46649321 ~ 46674372 (-)
tha1 LOC106608997 coding upstream 74730 46685639 ~ 46688357 (-)
LOC110502855 LOC106608961 coding upstream 264954 46875863 ~ 46882508 (-)
LOC110502858 LOC106608924 coding upstream 300601 46911510 ~ 46934903 (-)
G1872439 NA non-coding downstream 7298 46602483 ~ 46602988 (-)
G1872432 LOC106609027 non-coding downstream 18221 46590583 ~ 46592065 (-)
G1872390 NA non-coding downstream 106414 46503600 ~ 46503872 (-)
G1872389 NA non-coding downstream 106706 46503272 ~ 46503580 (-)
G1872388 NA non-coding downstream 107404 46502673 ~ 46502882 (-)
G1872524 LOC106608977 non-coding upstream 131775 46742684 ~ 46746407 (-)
G1872550 NA non-coding upstream 177580 46788489 ~ 46788895 (-)
G1872555 NA non-coding upstream 185961 46796870 ~ 46797194 (-)
G1872558 NA non-coding upstream 190663 46801572 ~ 46801785 (-)
G1872981 NA non-coding upstream 215811 46826720 ~ 46826935 (-)
G1872165 NA other downstream 580479 46027920 ~ 46029807 (-)
G1868940 LOC106611807 other downstream 3108853 43486868 ~ 43501433 (-)
G1868010 NA other downstream 3632142 42915406 ~ 42978144 (-)
srsf2a LOC106612293 other downstream 6425074 40179809 ~ 40185223 (-)
G1864033 NA other downstream 7156871 39449397 ~ 39453415 (-)
G1872556 NA other upstream 186326 46797235 ~ 46797650 (-)
G1873030 NA other upstream 330377 46941286 ~ 46942457 (-)
G1873043 NA other upstream 349713 46960622 ~ 46961653 (-)
LOC110502870 PHF5A other upstream 456999 47067897 ~ 47079813 (-)
G1873183 NA other upstream 646684 47257593 ~ 47312395 (-)

Expression


Co-expression Network